RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HAND1O96004 215 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 TAF15Q92804 592 aaKnown RBP eCLIP9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 OR2W1Q9Y3N9 320 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 DOCK8Q8NF50 2099 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 RIF1Q5UIP0 2472 aaKnown RBP9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 TRGV10A0A0A0MS01 117 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 ROM1Q03395 351 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 FNDC7Q5VTL7 733 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 RNASE6Q93091 150 aaKnown RBP9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 ASCL3Q9NQ33 180 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 OR10X1Q8NGY0 326 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 SNRNP40Q96DI7 357 aaKnown RBP9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 GPHA2Q96T91 129 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 CCL19Q99731 98 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 P01737 135 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 MELTFP08582 738 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 RFPL3SP0C7P2 107 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 EGR1P18146 543 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 RPS11P62280 158 aaKnown RBP eCLIP9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 IGFBP7Q16270 282 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 TMEM140Q9NV12 185 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
NPC1L1-201ENST00000289547 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 F2RP25116 425 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 GPR6P46095 362 aaPredicted RBP9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 ACSF3Q4G176 576 aaPredicted RBP9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 LINC01590Q5TEZ4 76 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 OR52L2PQ8NGH6 319 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 AUP1Q9Y679 476 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 TGFBR3LH3BV60 316 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 IL19Q9UHD0 177 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 ANAPC1Q9H1A4 1944 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 CCL2P13500 99 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 COL8A1P27658 744 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 OPRK1P41145 380 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 ONECUT1Q9UBC0 465 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 NPIPB7O75200 414 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 ASAH2BP0C7U1 165 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 Q6ZT83 130 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 FADS6Q8N9I5 356 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 MOB3AQ96BX8 217 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 R3HDM4Q96D70 268 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 PIMREGQ9BSJ6 248 aa9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 PEF1Q9UBV8 284 aaKnown RBP9.73□□□□□ -0.85
NPC1L1-201ENST00000289547 CNOT1A5YKK6 2376 aaKnown RBP9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 F8VVB4 439 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 F8VWA3 439 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 H0YIZ8 118 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 H3BVH4 76 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 IGHV3-13P01766 116 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 IGHV3-7P01780 117 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 FAM27BQ5VT28 67 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 LRRC29Q8WV35 223 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 TMEM45BQ96B21 275 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 NUDT3O95989 172 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 Q6ZS92 163 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 ABHD14AQ9BUJ0 271 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 MRPL37Q9BZE1 423 aaKnown RBP9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 ZFP30Q9Y2G7 519 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 RELBQ01201 579 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 MRGPRDQ8TDS7 321 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 C10orf35Q96D05 121 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 AICDAQ9GZX7 198 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 CLDN16Q9Y5I7 305 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 ORM2P19652 201 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 PSMB2P49721 201 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 TIMM23BQ5SRD1 257 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 LDLRAD2Q5SZI1 272 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 MUC15Q8N387 334 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 ADTRPQ96IZ2 230 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 RNF7Q9UBF6 113 aa9.72□□□□□ -0.85
NPC1L1-201ENST00000289547 CELA3AP09093 270 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 GCSHP23434 173 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 WNT5AP41221 380 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 ATP5J2P56134 94 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 PDPNQ86YL7 162 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 TMEM116Q8NCL8 245 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 WDYHV1Q96HA8 205 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 ABHD14BQ96IU4 210 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 J3QKU1 62 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 KLF4O43474 513 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 CD5P06127 495 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 SLC25A40Q8TBP6 338 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 RCC1LQ96I51 464 aaKnown RBP9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 IMMP2LQ96T52 175 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 SRXN1Q9BYN0 137 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 GAL3ST2Q9H3Q3 398 aa9.71□□□□□ -0.85
NPC1L1-201ENST00000289547 SPTA1P02549 2419 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms