RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ITLN2Q8WWU7 325 aaPredicted RBP8.35□□□□□ -1.07
C9orf43-201ENST00000288462 S1PR3Q99500 378 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 TSNAXQ99598 290 aaKnown RBP8.35□□□□□ -1.07
C9orf43-201ENST00000288462 CBLN4Q9NTU7 201 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 HIVEP3Q5T1R4 2406 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 COL6A6A6NMZ7 2263 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 YLPM1P49750 1951 aaKnown RBP8.35□□□□□ -1.07
C9orf43-201ENST00000288462 OR9G9P0C7N8 305 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 PJVKQ0ZLH3 352 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 TMEM155Q4W5P6 130 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 TMEM14EPQ6UXP3 125 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 ZNF833PQ6ZTB9 187 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 C8orf31Q8N9H6 132 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 ZNF596Q8TC21 504 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 H1FXQ92522 213 aaKnown RBP8.35□□□□□ -1.07
C9orf43-201ENST00000288462 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
C9orf43-201ENST00000288462 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
C9orf43-201ENST00000288462 HRNRQ86YZ3 2850 aaPredicted RBP8.34□□□□□ -1.07
C9orf43-201ENST00000288462 TRBV23-1A0A0A0MS06 115 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 METTL15P1P0C7V9 234 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 NQO2P16083 231 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 GNLYP22749 145 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 COL8A2P25067 703 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 F2RL1P55085 397 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 ARL16Q0P5N6 197 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 PDLIM3Q53GG5 364 aaPredicted RBP8.34□□□□□ -1.07
C9orf43-201ENST00000288462 ZNF525Q8N782 197 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.07
C9orf43-201ENST00000288462 SMG1Q96Q15 3661 aaKnown RBP8.34□□□□□ -1.07
C9orf43-201ENST00000288462 NBASA2RRP1 2371 aa8.34□□□□□ -1.07
C9orf43-201ENST00000288462 A0A087X0M5 115 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 A0A1B0GX30 115 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 LYNX1G3V0Z9 82 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 PPIHO43447 177 aaKnown RBP8.33□□□□□ -1.08
C9orf43-201ENST00000288462 LYNX1P0DP58 116 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 ERVK-16P61578 105 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 DTX2Q86UW9 622 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 BPIFCQ8NFQ6 507 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 RAB39BQ96DA2 213 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
C9orf43-201ENST00000288462 OR4C12Q96R67 309 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 QTRT1Q9BXR0 403 aaKnown RBP8.33□□□□□ -1.08
C9orf43-201ENST00000288462 PARD6GQ9BYG4 376 aaPredicted RBP8.33□□□□□ -1.08
C9orf43-201ENST00000288462 HRH4Q9H3N8 390 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 RELNP78509 3460 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 HBG1P69891 147 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 HBG2P69892 147 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 SPANXN5Q5MJ07 72 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 FAM71F2Q6NXP2 309 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 ZNF841Q6ZN19 808 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 TMEM182Q6ZP80 229 aaPredicted RBP8.33□□□□□ -1.08
C9orf43-201ENST00000288462 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 RAB1BQ9H0U4 201 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 TMEM140Q9NV12 185 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 ZNRD1Q9P1U0 126 aa8.33□□□□□ -1.08
C9orf43-201ENST00000288462 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 LY86O95711 162 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 CRYZL1O95825 349 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 ARG1P05089 322 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 SOD3P08294 240 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 CT45A6P0DMU7 189 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 CT45A5P0DMU8 189 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 CT45A7P0DMV0 189 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 CAMLGP49069 296 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 OR2B8PP59922 312 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 RUNX1Q01196 453 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 RELBQ01201 579 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 DHRS7BQ6IAN0 325 aaPredicted RBP8.32□□□□□ -1.08
C9orf43-201ENST00000288462 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 OR2G3Q8NGZ4 309 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 NUP50Q9UKX7 468 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 TET2Q6N021 2002 aaPredicted RBP8.32□□□□□ -1.08
C9orf43-201ENST00000288462 C1QL1O75973 258 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 IFNA5P01569 189 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 PLA2G5P39877 138 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 ZNF137PP52743 207 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 SPCS3P61009 180 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 SLC38A11Q08AI6 406 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 SSX9Q7RTT3 188 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 VKORC1L1Q8N0U8 176 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 NEU4Q8WWR8 484 aaPredicted RBP8.32□□□□□ -1.08
C9orf43-201ENST00000288462 FAM122AQ96E09 287 aa8.32□□□□□ -1.08
C9orf43-201ENST00000288462 A0A1W2PPR1 153 aa8.31□□□□□ -1.08
C9orf43-201ENST00000288462 C15orf61A6NNL5 157 aa8.31□□□□□ -1.08
C9orf43-201ENST00000288462 CEBPZOSA8MTT3 80 aa8.31□□□□□ -1.08
C9orf43-201ENST00000288462 GPR37O15354 613 aa8.31□□□□□ -1.08
C9orf43-201ENST00000288462 RBMXL2O75526 392 aaKnown RBP8.31□□□□□ -1.08
C9orf43-201ENST00000288462 SCAF4O95104 1147 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms