RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ST6GALNAC6Q969X2 333 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF581Q9P0T4 197 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 SNAI2O43623 268 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 SRP14P37108 136 aaKnown RBP10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 WNT5AP41221 380 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF83P51522 516 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 SOX8P57073 446 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 SPEM2Q0P670 501 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 IGFBP7Q16270 282 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 DCAF10Q5QP82 559 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 GFI1BQ5VTD9 330 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 PILRBQ9UKJ0 227 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 NPIPB13A6NJU9 1138 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 A6NNC1 897 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 NPIPB4C9JG80 1138 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 LYRM7Q5U5X0 104 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 R3HDM4Q96D70 268 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 OR2V2Q96R30 315 aa10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 ALKBH7Q9BT30 221 aaPredicted RBP10.75□□□□□ -0.69
SLC6A1-201ENST00000287766 HTTP42858 3142 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 LRRC30A6NM36 301 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 NUDT3O95989 172 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 PMELP40967 661 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 RNPS1Q15287 305 aaKnown RBP10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 PDPNQ86YL7 162 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 TTTY12Q9BZ98 90 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 DPRXA6NFQ7 191 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF826PQ6ZT77 177 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 REG4Q9BYZ8 158 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 OR2W1Q9Y3N9 320 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 SELENOKQ9Y6D0 94 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 SHISA7A6NL88 538 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BKO60814 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HAND1O96004 215 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BJP06899 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BOP23527 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BBP33778 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BDP58876 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BCP62807 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 TNFRSF9Q07011 255 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST2H2BEQ16778 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 NIT1Q86X76 327 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BHQ93079 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BNQ99877 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H2BMQ99879 126 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 MYOZ1Q9NP98 299 aaPredicted RBP10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 UBE2CO00762 179 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 CXorf1O96002 111 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 GPX4P36969 197 aaPredicted RBP10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 IMMP2LQ96T52 175 aa10.74□□□□□ -0.69
SLC6A1-201ENST00000287766 LAMA3Q16787 3333 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 MT-ND6P03923 174 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 SP1P08047 785 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF818PQ6ZRF7 136 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 SLC25A40Q8TBP6 338 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 TAF15Q92804 592 aaKnown RBP eCLIP10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 ZPBPQ9BS86 351 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 UMODP07911 640 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 TMEM187Q14656 261 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 UFC1Q9Y3C8 167 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 MED13LQ71F56 2210 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 TRGV10A0A0A0MS01 117 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 LOC390937A0A1W2PQ73 354 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 OR1B1Q8NGR6 318 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 TMEM222Q9H0R3 208 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 IL19Q9UHD0 177 aa10.73□□□□□ -0.69
SLC6A1-201ENST00000287766 LINC01387J3KSC0 135 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 CYC1P08574 325 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 STAG3L2P0CL84 134 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 HIST1H1EP10412 219 aaKnown RBP10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 TGIF2LYQ8IUE0 185 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 SAP30LQ9HAJ7 183 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 PROCRQ9UNN8 238 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 MPC1Q9Y5U8 109 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 F11RQ9Y624 299 aaKnown RBP10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 A0A1B0GV72 72 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 C10orf128Q5T292 105 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 PPP1R32Q7Z5V6 425 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 LRRC29Q8WV35 223 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 COLCA2A8K830 154 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 ZNF785A8K8V0 405 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 CD1BP29016 333 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 MAJINQ3KP22 176 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 PYY3Q5JQD4 70 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 SLC23A3Q6PIS1 610 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 SARAFQ96BY9 339 aa10.72□□□□□ -0.69
SLC6A1-201ENST00000287766 CYYR1Q96J86 154 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms