RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 C22orf34Q6ZV56 151 aa15.34■□□□□ 0.05
PDLIM3-201ENST00000284767 TAF15Q92804 592 aaKnown RBP eCLIP15.34■□□□□ 0.05
PDLIM3-201ENST00000284767 LHX4Q969G2 390 aa15.34■□□□□ 0.05
PDLIM3-201ENST00000284767 C2orf88Q9BSF0 95 aa15.34■□□□□ 0.05
PDLIM3-201ENST00000284767 SLC25A15Q9Y619 301 aa15.34■□□□□ 0.05
PDLIM3-201ENST00000284767 TMEM250H0YL14 139 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 IGKV1-5P01602 117 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 CEACAM6P40199 344 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 P2RY6Q15077 328 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 TBR1Q16650 682 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 BSXQ3C1V8 233 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 OR4C12Q96R67 309 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 PKIBQ9C010 78 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 SLC39A9Q9NUM3 307 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 LIN7CQ9NUP9 197 aaKnown RBP15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 GAB2Q9UQC2 676 aa15.33■□□□□ 0.05
PDLIM3-201ENST00000284767 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 IGLV1-44P01699 117 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 RNF224P0DH78 156 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 BMP5P22003 454 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 MSMPQ1L6U9 139 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 Q6ZR03 302 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 OR51G1Q8NGK1 321 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 ACY3Q96HD9 319 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 OR5B12Q96R08 314 aa15.33■□□□□ 0.04
PDLIM3-201ENST00000284767 FAM90A26D6RGX4 464 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 ST8SIA5O15466 376 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 IGLV2-14P01704 120 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 TFF1P04155 84 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 MDKP21741 143 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 RAB24Q969Q5 203 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 PPP5D1E7EU14 171 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 SIRPB1O00241 398 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 GCGP01275 180 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 CD55P08174 381 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 ELLP55199 621 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 FAM57AQ8TBR7 257 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 LAMP3Q9UQV4 416 aa15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 CHD3Q12873 2000 aaKnown RBP15.32■□□□□ 0.04
PDLIM3-201ENST00000284767 A8MWP6 167 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 H7BYZ3 331 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 GALR1P47211 349 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 PSMB3P49720 205 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 PDLIM4P50479 330 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 FAM3BP58499 235 aaPredicted RBP15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 RPL23P62829 140 aaKnown RBP15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 SLC38A11Q08AI6 406 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 FAM27E3Q08E93 113 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 PRAMEF6Q5VXH4 476 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 MOB1BQ7L9L4 216 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 XKRY2A2RUG3 117 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 M0R1B8 84 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 WNT9BO14905 357 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 TIMM8AO60220 97 aaPredicted RBP15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 FAM87AP0C7U9 286 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 SPANXN5Q5MJ07 72 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 LRP11Q86VZ4 500 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 RPP25LQ8N5L8 163 aaKnown RBP15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 OR1A1Q9P1Q5 309 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 UBE2L5PA0A1B0GUS4 154 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 Q6P435 159 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 UBALD1Q8TB05 177 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 TMEM170AQ8WVE7 144 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 IL1F10Q8WWZ1 152 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 ANAPC16Q96DE5 110 aa15.31■□□□□ 0.04
PDLIM3-201ENST00000284767 KIAA2026Q5HYC2 2103 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 K7ENP7 123 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 HRASP01112 189 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 TDGF1P3P51864 188 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 TESK1Q15569 626 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 KRTCAP3Q53RY4 240 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 TMEM14EPQ6UXP3 125 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 DOLPP1Q86YN1 238 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 KALRNO60229 2985 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 NXPH2O95156 264 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 OR2H2O95918 312 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 TIMP3P35625 211 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 ERVK11-1P61568 191 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 C11orf53Q8IXP5 236 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 BEND2Q8NDZ0 799 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 MANBALQ9NQG1 85 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 PPP1R3CQ9UQK1 317 aa15.3■□□□□ 0.04
PDLIM3-201ENST00000284767 SPTA1P02549 2419 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 CTXND1A0A1B0GTU2 59 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 IGKV1D-33P01593 117 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 IGKV1-33P01594 117 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 MBP02144 154 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 NDUFB7P17568 137 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 ZNF66Q6ZN08 573 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 NECAP1Q8NC96 275 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 RPUSD4Q96CM3 377 aaKnown RBP15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 NDUFAF3Q9BU61 184 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 DUSP13Q9UII6 198 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 GZMHP20718 246 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 TUBG1P23258 451 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 CEACAM8P31997 349 aaPredicted RBP15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 VHLLQ6RSH7 139 aa15.29■□□□□ 0.04
PDLIM3-201ENST00000284767 ZNF664Q8N3J9 261 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms