RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZNF717Q9BY31 904 aaPredicted RBP2.12□□□□□ -2.07
CHD1-201ENST00000284049 OR52D1Q9H346 318 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 SDF2L1Q9HCN8 221 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 SS18L2Q9UHA2 77 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 CARHSP1Q9Y2V2 147 aaKnown RBP2.12□□□□□ -2.07
CHD1-201ENST00000284049 MYO7AQ13402 2215 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 GPR31O00270 319 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 IMPA1P29218 277 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 PIGPP57054 158 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 C17orf58Q2M2W7 97 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 LGALSLQ3ZCW2 172 aaPredicted RBP2.12□□□□□ -2.07
CHD1-201ENST00000284049 EBLN2Q6P2I7 272 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 NOTCH2NLQ7Z3S9 236 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 FAM19A5Q7Z5A7 132 aaPredicted RBP2.12□□□□□ -2.07
CHD1-201ENST00000284049 CD177Q8N6Q3 437 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 OR10J6PQ8NGY7 276 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 PPTC7Q8NI37 304 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 NEUROG2Q9H2A3 272 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 WASHC3Q9Y3C0 194 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 MRASO14807 208 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 PDCD6O75340 191 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 CSN1S1P47710 185 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 TMEM97Q5BJF2 176 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 TMEM215Q68D42 235 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 CYHR1Q6ZMK1 362 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 SLC36A1Q7Z2H8 476 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 BAP18Q8IXM2 172 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 DCAF4L2Q8NA75 395 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 EFCAB11Q9BUY7 163 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 OR2D2Q9H210 308 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 PARP11Q9NR21 331 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 TAC3Q9UHF0 121 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 GREB1Q4ZG55 1949 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 MYH9P35579 1960 aaKnown RBP2.12□□□□□ -2.07
CHD1-201ENST00000284049 MCM3APO60318 1980 aa2.12□□□□□ -2.07
CHD1-201ENST00000284049 A0A0J9YXV3 536 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 RFPL4AA6NLU0 287 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 RFPL4AL1F8VTS6 287 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 K7ENP7 123 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 VENTXO95231 258 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 GADD45GO95257 159 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 CECR9P0C854 216 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SMIM17P0DL12 118 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 DEFA3P59666 94 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 C1QTNF8P60827 252 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 ACOT6Q3I5F7 207 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 GRINAQ7Z429 371 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 C6orf223Q8N319 242 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SLC25A45Q8N413 288 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SOSTQ9BQB4 213 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 RBFOX1Q9NWB1 397 aaKnown RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 IGHV3OR16-9A0A0B4J2B5 98 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SS18L1O75177 396 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 PIAS1O75925 651 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 OR5G3P0C626 314 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 RNF224P0DH78 156 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 CA5AP35218 305 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 TMEM183BQ1AE95 376 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 TMEM183AQ8IXX5 376 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 ZNF567Q8N184 647 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 LY6G5BQ8NDX9 201 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 OR51H1Q8NH63 302 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 CHCHD10Q8WYQ3 142 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 ZNF257Q9Y2Q1 563 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 ATG2BQ96BY7 2078 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 BAZ2BQ9UIF8 2168 aaKnown RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 PLAC8L1A1L4L8 177 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 J3QR89 54 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SOCS3O14543 225 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SEC11BP0C7V7 166 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 SMIM6P0DI80 62 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 ZNF630Q2M218 657 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 FBXL22Q6P050 247 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 IDO2Q6ZQW0 420 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 LRRC28Q86X40 367 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 SSC4DQ8WTU2 575 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 PAXXQ9BUH6 204 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 PROCRQ9UNN8 238 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 MUC22E2RYF6 1773 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 OR4C45A6NMZ5 311 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 RIIAD1A6NNX1 92 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 MARCKSL1P49006 195 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 H2BFSP57053 126 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 FABP5Q01469 135 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 ALKAL1Q6UXT8 129 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 CLVS1Q8IUQ0 354 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 ZNF525Q8N782 197 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 TMEM190Q8WZ59 177 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 TAMM41Q96BW9 452 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 OPRPNQ99935 248 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 COPZ2Q9P299 210 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 MTCL1Q9Y4B5 1905 aaKnown RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 INSP01308 110 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 IFNA4P05014 189 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 C2orf88Q9BSF0 95 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 MND1Q9BWT6 205 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 GNB1LQ9BYB4 327 aa2.11□□□□□ -2.07
CHD1-201ENST00000284049 KLF13Q9Y2Y9 288 aaPredicted RBP2.11□□□□□ -2.07
CHD1-201ENST00000284049 HLA-DRB1P01911 266 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms