RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 RNF122Q9H9V4 155 aa5.35□□□□□ -1.55
LIN7C-201ENST00000278193 NUDT4Q9NZJ9 180 aa5.35□□□□□ -1.55
LIN7C-201ENST00000278193 MRPL27Q9P0M9 148 aaKnown RBP5.35□□□□□ -1.55
LIN7C-201ENST00000278193 WASHC3Q9Y3C0 194 aa5.35□□□□□ -1.55
LIN7C-201ENST00000278193 ZNF728P0DKX0 622 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 CACNG7P62955 275 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 NXNL2Q5VZ03 156 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 C8orf82Q6P1X6 216 aaPredicted RBP5.34□□□□□ -1.55
LIN7C-201ENST00000278193 LRP11Q86VZ4 500 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 C4orf45Q96LM5 186 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 DERL3Q96Q80 235 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 DPY30Q9C005 99 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 VDAC3Q9Y277 283 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 LAMB1P07942 1786 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 A0A0D9SEW6 157 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 TNFAIP6P98066 277 aaPredicted RBP5.34□□□□□ -1.55
LIN7C-201ENST00000278193 LCN15Q6UWW0 184 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 CBLN2Q8IUK8 224 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 GAPTQ8N292 157 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 OR2A1Q8NGT9 310 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 FNDC9Q8TBE3 224 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 SMIM8Q96KF7 97 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 POLR2J3Q9H1A7 115 aaKnown RBP5.34□□□□□ -1.55
LIN7C-201ENST00000278193 AKIP1Q9NQ31 210 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 MCTS1Q9ULC4 181 aaKnown RBP5.34□□□□□ -1.55
LIN7C-201ENST00000278193 MYH6P13533 1939 aa5.34□□□□□ -1.55
LIN7C-201ENST00000278193 FAM183AA6NL82 134 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 TM4SF5O14894 197 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 FGF2P09038 288 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 UBE2E1P51965 193 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 TMEM244Q5VVB8 128 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 Q6ZVQ6 151 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.56
LIN7C-201ENST00000278193 PNRC2Q9NPJ4 139 aaKnown RBP5.34□□□□□ -1.56
LIN7C-201ENST00000278193 NUFIP1Q9UHK0 495 aaKnown RBP5.34□□□□□ -1.56
LIN7C-201ENST00000278193 POLR2AP24928 1970 aaKnown RBP5.34□□□□□ -1.56
LIN7C-201ENST00000278193 A0A0D9SG52 128 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 FAM157CP0CG43 387 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 SHC1P29353 583 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 ZNF140P52738 457 aaPredicted RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 NCBP2-AS2Q69YL0 99 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 KCNS1Q96KK3 526 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 DLEC1Q9Y238 1755 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 A0A0G2JND7 137 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 LOC100130705A0A1B0GUX0 176 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TMEM212A6NML5 194 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 J3QT63 122 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 GFRA3O60609 400 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 KBTBD11O94819 623 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 CTSDP07339 412 aaPredicted RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 HMGA1P17096 107 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 RPS10P46783 165 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 HMGN3Q15651 99 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 C9orf40Q8IXQ3 194 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 BPIFB6Q8NFQ5 453 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 FGF14Q92915 247 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TMEM222Q9H0R3 208 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 BANF2Q9H503 90 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TUBGCP6Q96RT7 1819 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 A0A1B0GVT2 93 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 C15orf61A6NNL5 157 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PRR32B1ATL7 298 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 SPRY3O43610 288 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 IGHV2-5P01817 119 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 FABP2P12104 132 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 H2BFSP57053 126 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 RND3P61587 244 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PLGLB1Q02325 96 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 GLYATL3Q5SZD4 288 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 COPS9Q8WXC6 57 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PLEKHB2Q96CS7 222 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 RTP4Q96DX8 246 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 FMC1Q96HJ9 113 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 RTBDNQ9BSG5 229 aaPredicted RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 SPANXDQ9BXN6 97 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 CKLFQ9UBR5 152 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 DICER1Q9UPY3 1922 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 GOLGB1Q14789 3259 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 MYH9P35579 1960 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 SPAARA0A1B0GVQ0 90 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 FNDC10F2Z333 226 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 GABARAPH6UMI1 98 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 LGALS1P09382 135 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 UBE2NP61088 152 aaKnown RBP5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PPP1CAP62136 330 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 HLA-DRB3P79483 266 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PAPPA-AS1Q5QFB9 102 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 C1QL3Q5VWW1 255 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 C22orf34Q6ZV56 151 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TRAPPC6BQ86SZ2 158 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TMEM255BQ8WV15 326 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 TM2D1Q9BX74 207 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 PBOV1Q9GZY1 135 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 IFI27L2Q9H2X8 130 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 JPT2Q9H910 190 aa5.33□□□□□ -1.56
LIN7C-201ENST00000278193 MRPS14O60783 128 aaKnown RBP5.32□□□□□ -1.56
LIN7C-201ENST00000278193 CATR1Q13166 79 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms