RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 KIR2DL4Q99706 377 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 PARLQ9H300 379 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 OR51M1Q9H341 326 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 PITX3O75364 302 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 ZNF107Q9UII5 783 aaPredicted RBP17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 SELENOTP62341 195 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 ZP4Q12836 540 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 LINC00527Q9UJ94 153 aa17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 PRRC2BQ5JSZ5 2229 aaKnown RBP17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 ZNF638Q14966 1978 aaKnown RBP17.42■□□□□ 0.38
CACNA1B-201ENST00000277549 SYNGR3O43761 229 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 KLK2P20151 261 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 FBXL7Q9UJT9 491 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 ODAMA1E959 279 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 K7ERU9 68 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 CRHP06850 196 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 RNF133Q8WVZ7 376 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 MARS2Q96GW9 593 aaKnown RBP17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 SIGLEC12Q96PQ1 595 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 CRYBB3P26998 211 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 LINC00305Q7Z4B0 112 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 ZBTB34Q8NCN2 500 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 SNAI2O43623 268 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 C1QCP02747 245 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 COX6A1P12074 109 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 TRBV7-9A0A0J9YWB2 115 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 LYNX1G3V0Z9 82 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 LYNX1P0DP58 116 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 FGF12P61328 243 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 SAP25Q8TEE9 199 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 NPIPB3Q92617 1050 aa17.41■□□□□ 0.38
CACNA1B-201ENST00000277549 A8MWL6 223 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 ASCL4Q6XD76 172 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 LNP1A1A4G5 178 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 C10orf128Q5T292 105 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 TMEM70Q9BUB7 260 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 CYB561D1Q8N8Q1 229 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 PPP1R27Q86WC6 154 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 OR51G1Q8NGK1 321 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 C17orf51A8MQB3 221 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 SPAG8Q99932 426 aaPredicted RBP17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 LDLRAD2Q5SZI1 272 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 BIVMQ86UB2 503 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 SCARF2Q96GP6 870 aaPredicted RBP17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 METRNQ9UJH8 293 aa17.4■□□□□ 0.38
CACNA1B-201ENST00000277549 SFXN3Q9BWM7 321 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 OR5AC2Q9NZP5 309 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 C5orf67F2Z3F1 127 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 HKR1P10072 659 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 TRAV24A0A0B4J272 114 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 NDUFA3O95167 84 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 NPBWR2P48146 333 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 ICAM4Q14773 271 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 TRAV8-6A0A0B4J262 113 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 TIAF1O95411 115 aa17.39■□□□□ 0.37
CACNA1B-201ENST00000277549 B9A039 149 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 PGLYRP1O75594 196 aaPredicted RBP17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 FAM89BQ8N5H3 189 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 OR5AN1Q8NGI8 311 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 NXT2Q9NPJ8 142 aaKnown RBP17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 SPAG17Q6Q759 2223 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 OGG1O15527 345 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 RPL35AP18077 110 aaKnown RBP17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 OR1P1Q8NH06 330 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 SEMA5BQ9P283 1151 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 A0A0U1RRA0 63 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 PNRC1Q12796 327 aaPredicted RBP17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 LHFPL4Q7Z7J7 247 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 C2orf88Q9BSF0 95 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 PPP1R32Q7Z5V6 425 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 WDR34Q96EX3 536 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 LOXL4Q96JB6 756 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 OR9G1Q8NH87 305 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 GRIFINA4D1Z8 144 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 TFF1P04155 84 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 WDR82Q6UXN9 313 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 DNAJC4Q9NNZ3 241 aa17.38■□□□□ 0.37
CACNA1B-201ENST00000277549 GAGE10A6NGK3 116 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 CD33P20138 364 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 SLIRPQ9GZT3 109 aaKnown RBP17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 C1QAP02745 245 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 TTC32Q5I0X7 151 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 DLL3Q9NYJ7 618 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 C7orf77A4D0Y5 90 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 FXYD7P58549 80 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 BHLHA9Q7RTU4 235 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 OR11H7Q8NGC8 314 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 RARRES2Q99969 163 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 IGHV3-73A0A0B4J1V6 119 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 SAP30O75446 220 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 RHOVQ96L33 236 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 ST6GALNAC3Q8NDV1 305 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 OR9G4Q8NGQ1 327 aa17.37■□□□□ 0.37
CACNA1B-201ENST00000277549 NANOS3P60323 173 aaKnown RBP17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 RPS11P62280 158 aaKnown RBP eCLIP17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 ELF5Q9UKW6 265 aaPredicted RBP17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 HS3ST3B1Q9Y662 390 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 TRAV30A0A087WSZ9 112 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 MRPL18Q9H0U6 180 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms