RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 LPAR2Q9HBW0 351 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 TCF19Q9Y242 345 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 TSPAN2O60636 221 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 CA1P00915 261 aaPredicted RBP7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 SH3BGRL3Q9H299 93 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 NUP98P52948 1817 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 TRAV8-6A0A0B4J262 113 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 NPFFO15130 113 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 LDLRAD4O15165 306 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 UPK3AO75631 287 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 GPX1P07203 203 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 UCP2P55851 309 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM160Q9NX00 188 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 MAST2Q6P0Q8 1798 aa7.49□□□□□ -1.21
SCUBE3-201ENST00000274938 ZG16O60844 167 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 APELAP0DMC3 54 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 Q96M66 194 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF385AQ96PM9 386 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 CALYQ9NYX4 217 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 IGLV1-36A0A0B4J1U3 117 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 LINC01565O15544 149 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 PLAUP00749 431 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 CBLN1P23435 193 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF56Q15929 161 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 RBMY1BA6NDE4 496 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 RBMY1EA6NEQ0 496 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 RBMY1DP0C7P1 496 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 FGF5P12034 268 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 ID4P47928 161 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 OR4C13Q8NGP0 309 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM186Q96B77 213 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 LAMTOR2Q9Y2Q5 125 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 hCG_38984A0A1B0GV85 526 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 CCL13Q99616 98 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF708P17019 499 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 GPR183P32249 361 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 HCP5Q6MZN7 132 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 PCSK4Q6UW60 755 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 DNM1P46Q6ZS02 220 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 DLL3Q9NYJ7 618 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 J3QW42 95 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM170BQ5T4T1 132 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM101Q96IK0 257 aa7.48□□□□□ -1.21
SCUBE3-201ENST00000274938 ODAMA1E959 279 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 RFLNBQ8N5W9 214 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 SRP19P09132 144 aaKnown RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 COL9A1P20849 921 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 APOBEC4Q8WW27 367 aaKnown RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM50AO95807 157 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 TBR1Q16650 682 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 WNT2BQ93097 391 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM14DPA8MWL7 114 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 WISP3O95389 354 aaPredicted RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 CD160O95971 181 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 TSPAN7P41732 249 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 ST6GALNAC3Q8NDV1 305 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 KLK15Q9H2R5 256 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 FSCN3Q9NQT6 498 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 HRKO00198 91 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 SPINK2P20155 84 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 PTGDSP41222 190 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 ATP5G2Q06055 141 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 C3AR1Q16581 482 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 GOLT1AQ6ZVE7 132 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 TMEM171Q8WVE6 324 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 FMC1Q96HJ9 113 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 IL6RP08887 468 aaPredicted RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 SRSF5Q13243 272 aaKnown RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 OR9G1Q8NH87 305 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 RCC1LQ96I51 464 aaKnown RBP7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 ANAPC13Q9BS18 74 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF257Q9Y2Q1 563 aa7.47□□□□□ -1.21
SCUBE3-201ENST00000274938 ANKRD36CQ5JPF3 1778 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 LOC390937A0A1W2PQ73 354 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 IZUMO1RA6ND01 250 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 FAM159AQ6UWV7 190 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 SCGB3A1Q96QR1 104 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 NPPCP23582 126 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 ZNF324BQ6AW86 544 aaPredicted RBP7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 C14orf144Q96I85 54 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 SIGMAR1Q99720 223 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 TIMP4Q99727 224 aa7.46□□□□□ -1.21
SCUBE3-201ENST00000274938 SLC25A2Q9BXI2 301 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms