RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 FAM234AQ9H0X4 552 aa10.85□□□□□ -0.67
HERC6-202ENST00000273960 BET1LQ9NYM9 111 aa10.85□□□□□ -0.67
HERC6-202ENST00000273960 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 ZIC3O60481 467 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 A0A1W2PQM1 296 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 H0Y980 276 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 TNFSF11O14788 317 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 SYNGR1O43759 233 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 IGLC2P0DOY2 106 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 GFRA1P56159 465 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 C1orf174Q8IYL3 243 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 OR4B1Q8NGF8 309 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 SSMEM1Q8WWF3 244 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 TMEM131Q92545 1883 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 PRR14LQ5THK1 2151 aa10.84□□□□□ -0.67
HERC6-202ENST00000273960 SRIP30626 198 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 LTC4SQ16873 150 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 Q5PR19 223 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 OR4A47Q6IF82 309 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 Q8NFD4 153 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 CLCF1Q9UBD9 225 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 COX11Q9Y6N1 276 aa10.83□□□□□ -0.67
HERC6-202ENST00000273960 DPRXA6NFQ7 191 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 CA1P00915 261 aaPredicted RBP10.83□□□□□ -0.68
HERC6-202ENST00000273960 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 CDKN1BP46527 198 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 LCN2P80188 198 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 NHLRC2Q8NBF2 726 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 AGMATQ9BSE5 352 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
HERC6-202ENST00000273960 PCED1AQ9H1Q7 454 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 BLACEA4D250 179 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 SNAI2O43623 268 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 RAMP3O60896 148 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 TYMSP04818 313 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 CA6P23280 308 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 HOXA4Q00056 320 aaPredicted RBP10.83□□□□□ -0.68
HERC6-202ENST00000273960 OR10P1Q8NGE3 313 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 OR1F12Q8NHA8 337 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 RNF2Q99496 336 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 WASHC3Q9Y3C0 194 aa10.83□□□□□ -0.68
HERC6-202ENST00000273960 ACTL6BO94805 426 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 IGHV3-13P01766 116 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 IGHV3-7P01780 117 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 DOLPP1Q86YN1 238 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 NAA38Q9BRA0 125 aaKnown RBP10.82□□□□□ -0.68
HERC6-202ENST00000273960 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 GPX1P07203 203 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 EPHA8P29322 1005 aaPredicted RBP10.82□□□□□ -0.68
HERC6-202ENST00000273960 FUT6P51993 359 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 UBE2NP61088 152 aaKnown RBP10.82□□□□□ -0.68
HERC6-202ENST00000273960 FGFRL1Q8N441 504 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 ZNF439Q8NDP4 499 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
HERC6-202ENST00000273960 SPTA1P02549 2419 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 TSPOP30536 169 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 NABP1Q96AH0 204 aa10.82□□□□□ -0.68
HERC6-202ENST00000273960 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
HERC6-202ENST00000273960 ATG2AQ2TAZ0 1938 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 OR2T8A6NH00 312 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 TRAPPC2LH3BP13 241 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 BCL2L2Q92843 193 aaPredicted RBP10.81□□□□□ -0.68
HERC6-202ENST00000273960 MTCH1Q9NZJ7 389 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 SLC45A2Q9UMX9 530 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 OR2W1Q9Y3N9 320 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 ARL2-SNX15V9GYD0 113 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 DMDP11532 3685 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 KCNMB1Q16558 191 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 ZNF841Q6ZN19 808 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 STPG3Q8N7X2 389 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 C19orf25Q9UFG5 118 aaPredicted RBP10.81□□□□□ -0.68
HERC6-202ENST00000273960 IGHV5-10-1A0A0J9YXX1 117 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 TIMP3P35625 211 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 DAZAP2Q15038 168 aaPredicted RBP10.81□□□□□ -0.68
HERC6-202ENST00000273960 HES3Q5TGS1 186 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
HERC6-202ENST00000273960 ZNF83P51522 516 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 RPL19P84098 196 aaKnown RBP10.8□□□□□ -0.68
HERC6-202ENST00000273960 MPV17L2Q567V2 206 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 AMMECR1LQ6DCA0 310 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 MMD2Q8IY49 270 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 ORAOV1Q8WV07 137 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 DUSP23Q9BVJ7 150 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 SSBP3Q9BWW4 388 aaPredicted RBP10.8□□□□□ -0.68
HERC6-202ENST00000273960 QTRT1Q9BXR0 403 aaKnown RBP10.8□□□□□ -0.68
HERC6-202ENST00000273960 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 ZNF891A8MT65 544 aaPredicted RBP10.8□□□□□ -0.68
HERC6-202ENST00000273960 TNFSF4P23510 183 aa10.8□□□□□ -0.68
HERC6-202ENST00000273960 GPR6P46095 362 aaPredicted RBP10.8□□□□□ -0.68
HERC6-202ENST00000273960 PSG7Q13046 419 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms