RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 A0A1W2PP11 408 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 MTFP1Q9UDX5 166 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 K7N7A8 449 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 NDUFS5O43920 106 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 EML2O95834 649 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 CTSDP07339 412 aaPredicted RBP13.75□□□□□ -0.21
UBR3-201ENST00000272793 MYOGP15173 224 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 LINC00158P58513 81 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 RPL31P62899 125 aaKnown RBP13.75□□□□□ -0.21
UBR3-201ENST00000272793 KIRREL2Q6UWL6 708 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 ZNF385AQ96PM9 386 aaKnown RBP13.75□□□□□ -0.21
UBR3-201ENST00000272793 A0A0U1RQV5 110 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 PPIAL4DF5H284 164 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 M0R2P5 195 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 PCMT1P22061 227 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 RNASE4P34096 147 aaKnown RBP13.75□□□□□ -0.21
UBR3-201ENST00000272793 ZNF818PQ6ZRF7 136 aa13.75□□□□□ -0.21
UBR3-201ENST00000272793 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
UBR3-201ENST00000272793 A0A1W2PPE3 182 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 FGF20Q9NP95 211 aaPredicted RBP13.74□□□□□ -0.21
UBR3-201ENST00000272793 NEU3Q9UQ49 428 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 HCFC1P51610 2035 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
UBR3-201ENST00000272793 VSIG10L2P0DP72 767 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 NABP2Q9BQ15 211 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 GLRXP35754 106 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 LINC01387J3KSC0 135 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 PLNP26678 52 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 ATXN8Q156A1 80 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 FAM219BQ5XKK7 198 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
UBR3-201ENST00000272793 PIGYQ3MUY2 71 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 OR2H1Q9GZK4 316 aa13.74□□□□□ -0.21
UBR3-201ENST00000272793 CACNA1GO43497 2377 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 SORL1Q92673 2214 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 CDIPTO14735 213 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 AGAP20933 346 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 LYZL2Q7Z4W2 148 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 TMEM171Q8WVE6 324 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 GREB1LQ9C091 1923 aaPredicted RBP13.73□□□□□ -0.21
UBR3-201ENST00000272793 SPINK14Q6IE38 97 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 TRAV17A0A0B4J275 112 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 H3BUT2 72 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 ZNF585BQ52M93 769 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 LINC01587Q99440 93 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 ATXN7O15265 892 aaPredicted RBP13.73□□□□□ -0.21
UBR3-201ENST00000272793 PPYP01298 95 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 MYF5P13349 255 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 NFAM1Q8NET5 270 aaPredicted RBP13.73□□□□□ -0.21
UBR3-201ENST00000272793 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
UBR3-201ENST00000272793 NHP2Q9NX24 153 aaKnown RBP13.73□□□□□ -0.21
UBR3-201ENST00000272793 PRTN3P24158 256 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 GGACTQ9BVM4 153 aa13.73□□□□□ -0.21
UBR3-201ENST00000272793 PATE4P0C8F1 98 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 TSPAN7P41732 249 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 FHITP49789 147 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 RIMKLAQ8IXN7 391 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 ZBTB34Q8NCN2 500 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 OR51M1Q9H341 326 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 A8MWV9 139 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 TP53I13Q8NBR0 393 aaPredicted RBP13.72□□□□□ -0.21
UBR3-201ENST00000272793 WNT2BQ93097 391 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 MRC1P22897 1456 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 ETHE1O95571 254 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 TNFRSF12AQ9NP84 129 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 MUC21A0A0G2JKD1 596 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 MUC21A0A140T8X8 626 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 H3BMM0 161 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 ASIPP42127 132 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 FUT5Q11128 374 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 MUC21Q5SSG8 566 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 UBE2WQ96B02 151 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 HPRT1P00492 218 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 ZNF114Q8NC26 417 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
UBR3-201ENST00000272793 SPINT1O43278 529 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.21
UBR3-201ENST00000272793 ABHD1Q96SE0 405 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 EFNB1P98172 346 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 VKORC1Q9BQB6 163 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 COL10A1Q03692 680 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 FBXL15Q9H469 300 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms