RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ARRDC1Q8N5I2 433 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 ZBTB34Q8NCN2 500 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 RASL11BQ9BPW5 248 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
SS18-202ENST00000269138 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 RRHO14718 337 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
SS18-202ENST00000269138 NDUFA3O95167 84 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 IGLV2-23P01705 113 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 VDAC2P45880 294 aaPredicted RBP10.1□□□□□ -0.79
SS18-202ENST00000269138 PPP5CP53041 499 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 UCP3P55916 312 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 TAGLNQ01995 201 aaKnown RBP10.1□□□□□ -0.79
SS18-202ENST00000269138 MEF2DQ14814 521 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 C5orf64Q2M2E5 130 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 ARSJQ5FYB0 599 aaPredicted RBP10.1□□□□□ -0.79
SS18-202ENST00000269138 GDPD1Q8N9F7 314 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 OR51H1Q8NH63 302 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 TERB2Q8NHR7 220 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 RNF5Q99942 180 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 HSPB9Q9BQS6 159 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 AKIP1Q9NQ31 210 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 LIN7CQ9NUP9 197 aaKnown RBP10.1□□□□□ -0.79
SS18-202ENST00000269138 PRELID3BQ9Y3B1 194 aa10.1□□□□□ -0.79
SS18-202ENST00000269138 DISC1C4P0D8 188 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 GPR31O00270 319 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 FCN1O00602 326 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 SHOXO15266 292 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 VSIG10L2P0DP72 767 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 RRASP10301 218 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 PGAM2P15259 253 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 PI3P19957 117 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 HIST2H2BDQ6DRA6 164 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 TOMM5Q8N4H5 51 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 KLHDC1Q8N7A1 406 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 OR51S1Q8NGJ8 323 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 HARBI1Q96MB7 349 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 TSNAXQ99598 290 aaKnown RBP10.09□□□□□ -0.79
SS18-202ENST00000269138 HRASLSQ9HDD0 168 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
SS18-202ENST00000269138 SLC25A17O43808 307 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 RAMP3O60896 148 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 IGHG2P01859 326 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 RLN1P04808 185 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 ZNF45Q02386 682 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 CBX3Q13185 183 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 LIN54Q6MZP7 749 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 LPCAT3Q6P1A2 487 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 SLC35E3Q7Z769 313 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 SLC38A6Q8IZM9 456 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 OR13C8Q8NGS7 320 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 MARCH1Q8TCQ1 289 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 BORCS5Q969J3 196 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
SS18-202ENST00000269138 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 WNT10AQ9GZT5 417 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
SS18-202ENST00000269138 METTL1Q9UBP6 276 aaKnown RBP10.08□□□□□ -0.8
SS18-202ENST00000269138 CRYGBP07316 175 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 LGALS7P47929 136 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 PJVKQ0ZLH3 352 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 PLGLAQ15195 96 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
SS18-202ENST00000269138 C10orf99Q6UWK7 81 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 CMTM1Q8IZ96 169 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 VKORC1L1Q8N0U8 176 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 ZNF747Q9BV97 191 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 SPDEFO95238 335 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 AP3S2P59780 193 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 CATR1Q13166 79 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 MRGPRG-AS1Q2M3A8 158 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 IDO2Q6ZQW0 420 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 LINC00299Q6ZSB3 139 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 TBC1D26Q86UD7 250 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 OSR1Q8TAX0 266 aaPredicted RBP10.07□□□□□ -0.8
SS18-202ENST00000269138 WIPF2Q8TF74 440 aaPredicted RBP10.07□□□□□ -0.8
SS18-202ENST00000269138 PRRT1Q99946 306 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 SLC2A9Q9NRM0 540 aa10.07□□□□□ -0.8
SS18-202ENST00000269138 IL7P13232 177 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 PIGPP57054 158 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 UBE2KP61086 200 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 CX3CL1P78423 397 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 NDPQ00604 133 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 ZNF585BQ52M93 769 aa10.06□□□□□ -0.8
SS18-202ENST00000269138 TRIQKQ629K1 86 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms