RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IGHV2-26A0A0B4J1V2 119 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 M0R1W7 72 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 IGLV1-47P01700 117 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 NQO2P16083 231 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 PDLIM4P50479 330 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 DHRS7BQ6IAN0 325 aaPredicted RBP13.33□□□□□ -0.28
TPM1-201ENST00000267996 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 Q8N7P7 452 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 RAB40CQ96S21 281 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 LYRM2Q9NU23 88 aaPredicted RBP13.33□□□□□ -0.28
TPM1-201ENST00000267996 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
TPM1-201ENST00000267996 WRBO00258 174 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 SYNGR2O43760 224 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 NXPH3O95157 252 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 SPDEFO95238 335 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 LMO4P61968 165 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 VAMP2P63027 116 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 TAGLNQ01995 201 aaKnown RBP13.32□□□□□ -0.28
TPM1-201ENST00000267996 BEND2Q8NDZ0 799 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 OR5AN1Q8NGI8 311 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
TPM1-201ENST00000267996 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
TPM1-201ENST00000267996 A8MXK9 166 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 CRYZL1O95825 349 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 HTR2BP41595 481 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 PRRX1P54821 245 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 C1orf122Q6ZSJ8 110 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 SCARB1Q8WTV0 552 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 CLEC7AQ9BXN2 247 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 ZC4H2Q9NQZ6 224 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 FBXL17Q9UF56 701 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 WSB1Q9Y6I7 421 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 RPS10-NUDT3A0A1W2PQS6 291 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 A1L4Q6 167 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 FAM24AA6NFZ4 105 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
TPM1-201ENST00000267996 OR9G9P0C7N8 305 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 RRASP10301 218 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 PAX1P15863 534 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
TPM1-201ENST00000267996 IL3RAP26951 378 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 TAS2R30P59541 319 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 ERVK-16P61578 105 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-201ENST00000267996 PAX2Q02962 417 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 HLA-DRB5Q30154 266 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 TMEM252Q8N6L7 170 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 KIR3DL3Q8N743 410 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 CLDND2Q8NHS1 167 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 PHYHIPLQ96FC7 376 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
TPM1-201ENST00000267996 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 SLC25A31Q9H0C2 315 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 ONECUT1Q9UBC0 465 aa13.31□□□□□ -0.28
TPM1-201ENST00000267996 H0YJW9 148 aa13.3□□□□□ -0.28
TPM1-201ENST00000267996 ALKAL2Q6UX46 152 aa13.3□□□□□ -0.28
TPM1-201ENST00000267996 GSX2Q9BZM3 304 aa13.3□□□□□ -0.28
TPM1-201ENST00000267996 BARX1Q9HBU1 254 aaPredicted RBP13.3□□□□□ -0.28
TPM1-201ENST00000267996 SPG11Q96JI7 2443 aa13.3□□□□□ -0.28
TPM1-201ENST00000267996 MED6O75586 246 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 HRASP01112 189 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 IL6RP08887 468 aaPredicted RBP13.29□□□□□ -0.28
TPM1-201ENST00000267996 TPT1P13693 172 aaKnown RBP13.29□□□□□ -0.28
TPM1-201ENST00000267996 PRTN3P24158 256 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 CAV2P51636 162 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 DLX1P56177 255 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 UBE2KP61086 200 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 ARF6P62330 175 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 RPL23AP62750 156 aaKnown RBP13.29□□□□□ -0.28
TPM1-201ENST00000267996 NHLH2Q02577 135 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 DIAPH2-AS1Q14236 149 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 CLLU1Q5K131 121 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 OR8H3Q8N146 312 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 RHOVQ96L33 236 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 RBKSQ9H477 322 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 ITGB1BP2Q9UKP3 347 aa13.29□□□□□ -0.28
TPM1-201ENST00000267996 VWC2LB2RUY7 222 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 BUB1B-PAK6H3BSN5 160 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 NDUFS8O00217 210 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 TXNL1O43396 289 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 ATP6V1G1O75348 118 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 APOA2P02652 100 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 RELBQ01201 579 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 PDLIM3Q53GG5 364 aaPredicted RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 RPL7L1Q6DKI1 246 aaKnown RBP13.28□□□□□ -0.28
TPM1-201ENST00000267996 TGIF2LXQ8IUE1 241 aa13.28□□□□□ -0.28
TPM1-201ENST00000267996 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms