RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZNF253O75346 499 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 CCL4P13236 92 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 LRRC75BQ2VPJ9 315 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 OR52L2PQ8NGH6 319 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 DPF1Q92782 380 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 PNRC2Q9NPJ4 139 aaKnown RBP7.42□□□□□ -1.22
VAPB-201ENST00000265619 ZNF586Q9NXT0 402 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 LILRA5A6NI73 299 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 SIRPB1O00241 398 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 FCN1O00602 326 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 CA2P00918 260 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 OTX2P32243 289 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 FOXL1Q12952 345 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 GCSAMLQ5JQS6 135 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 CARD17Q5XLA6 110 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 DDIT4LQ96D03 193 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 FER1L5A0AVI2 2057 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 DNAJC13O75165 2243 aa7.42□□□□□ -1.22
VAPB-201ENST00000265619 IFNA1P01562 189 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 CEBPDP49716 269 aaPredicted RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 IGFBP7Q16270 282 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 WDR61Q9GZS3 305 aaKnown RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 CCL28Q9NRJ3 127 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 SNURFLB1AK76 121 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 C11orf94C9JXX5 98 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 NTF3P20783 257 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 RAET1LQ5VY80 246 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 NAA38Q9BRA0 125 aaKnown RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 CRIM1Q9NZV1 1036 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 MRPL27Q9P0M9 148 aaKnown RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 PILRBQ9UKJ0 227 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 CEP295Q9C0D2 2601 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 LRP4O75096 1905 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 IGKV1-12A0A0C4DH73 117 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 NPIPA5E9PKD4 350 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 CLDN14O95500 239 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 IGKV1D-12P01611 117 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 IGHMP01871 453 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 LIPFP07098 398 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 HERV-K104P61576 105 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 TGFBR3Q03167 851 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 PLPPR5Q32ZL2 321 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 NEIL1Q96FI4 390 aaPredicted RBP7.41□□□□□ -1.22
VAPB-201ENST00000265619 ATP6V0BQ99437 205 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 NPIPA1Q9UND3 350 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 WASHC3Q9Y3C0 194 aa7.41□□□□□ -1.22
VAPB-201ENST00000265619 H3BMH7 237 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 K7EN84 100 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 STAG3L2P0CL84 134 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 Q56UQ5 140 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 LRRC10Q5BKY1 277 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 STPG3Q8N7X2 389 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 OR5D13Q8NGL4 314 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 TAF15Q92804 592 aaKnown RBP eCLIP7.4□□□□□ -1.22
VAPB-201ENST00000265619 GPR27Q9NS67 375 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 COPS7AQ9UBW8 275 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 PIEZO2Q9H5I5 2752 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 K7ERU9 68 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 NUDT3O95989 172 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 PPOXP50336 477 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 CLDN15P56746 228 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 ZNF90Q03938 601 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 TFF3Q07654 80 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 EBLN2Q6P2I7 272 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 PIGLQ9Y2B2 252 aa7.4□□□□□ -1.22
VAPB-201ENST00000265619 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 SCTP09683 121 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 KITLGP21583 273 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 OTX1P32242 354 aaPredicted RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 ARF1P84077 181 aaKnown RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 PLCXD2Q0VAA5 305 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 Q0VG73 95 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 FUT7Q11130 342 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 CNN3Q15417 329 aaKnown RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 ADIPOQQ15848 244 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 SPANXN5Q5MJ07 72 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 VASH2Q86V25 355 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 OR1B1Q8NGR6 318 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 SAP25Q8TEE9 199 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 PSMG3Q9BT73 122 aaPredicted RBP7.4□□□□□ -1.23
VAPB-201ENST00000265619 LOC400499M0QZD8 3231 aa7.4□□□□□ -1.23
VAPB-201ENST00000265619 BOD1L1Q8NFC6 3051 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 IGHV5-10-1A0A0J9YXX1 117 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 A0A1B0GX78 115 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 F5H5K5 113 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 NRASP01111 189 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 KRASP01116 189 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 IGKV1-39P01597 117 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 IGKV1D-39P04432 117 aa7.39□□□□□ -1.23
VAPB-201ENST00000265619 CD99P14209 185 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms