RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 HLA-DRB5Q30154 266 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 CPT1CQ8TCG5 803 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
NUP54-201ENST00000264883 TRAV9-1A0A075B6T8 112 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 hCG_38984A0A1B0GV85 526 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 SCRG1O75711 98 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 PMCHP20382 165 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 COX5AP20674 150 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 PNKDQ8N490 385 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 OR2AE1Q8NHA4 323 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 RARRES3Q9UL19 164 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 DMDP11532 3685 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 TUSC2O75896 110 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 PSG1P11464 419 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 IER3P46695 156 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 PRRX1P54821 245 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 FOXL2P58012 376 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 ZDHHC23Q8IYP9 409 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 ZIC4Q8N9L1 334 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 GMPPAQ96IJ6 420 aaPredicted RBP11.08□□□□□ -0.64
NUP54-201ENST00000264883 UHRF2Q96PU4 802 aa11.08□□□□□ -0.64
NUP54-201ENST00000264883 WDFY4Q6ZS81 3184 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 LRP5LA4QPB2 252 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 TIMP3P35625 211 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 ATP5G3P48201 142 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 PRSS12P56730 875 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 PLCXD3Q63HM9 321 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 ERASQ7Z444 233 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 ATOH7Q8N100 152 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 KCNS1Q96KK3 526 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 TMEM38BQ9NVV0 291 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
NUP54-201ENST00000264883 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 A0A1W2PS18 150 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 PATE3B3GLJ2 98 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 DEGS1O15121 323 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 CFIP05156 583 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 LIFP15018 202 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 THBS3P49746 956 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 RAET1LQ5VY80 246 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 ZNF596Q8TC21 504 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 BCL2L2Q92843 193 aaPredicted RBP11.06□□□□□ -0.64
NUP54-201ENST00000264883 LSM10Q969L4 123 aaKnown RBP11.06□□□□□ -0.64
NUP54-201ENST00000264883 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 MRPL27Q9P0M9 148 aaKnown RBP11.06□□□□□ -0.64
NUP54-201ENST00000264883 NCOA6Q14686 2063 aaPredicted RBP11.06□□□□□ -0.64
NUP54-201ENST00000264883 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 PRAMEF20Q5VT98 475 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 GUSBP11Q6P575 273 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 SLC23A3Q6PIS1 610 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 BATF2Q8N1L9 274 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 SPSB4Q96A44 273 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 STRADBQ9C0K7 418 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 CHODLQ9H9P2 273 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 KCNIP2Q9NS61 270 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 SEC16AO15027 2179 aa11.06□□□□□ -0.64
NUP54-201ENST00000264883 K7ERU9 68 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 RAC2P15153 192 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 GABRA2P47869 451 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 STUMQ69YW2 141 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 PRR27Q6MZM9 219 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 MUC15Q8N387 334 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 WDR54Q9H977 334 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 SPEGQ15772 3267 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 LOC102724200A0A096LPH7 203 aaPredicted RBP11.05□□□□□ -0.64
NUP54-201ENST00000264883 ZNF891A8MT65 544 aaPredicted RBP11.05□□□□□ -0.64
NUP54-201ENST00000264883 PRSS47A8MTI9 375 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 PRR33A8MZF0 331 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 DEFA4P12838 97 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 ZNF83P51522 516 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 GFRA1P56159 465 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 RAC3P60763 192 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 TRIM61Q5EBN2 209 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 OR10J3Q5JRS4 329 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 C1orf185Q5T7R7 199 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 OR4A47Q6IF82 309 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 LINC00596Q86U02 117 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 ZNF611Q8N823 705 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 APOBEC3DQ96AK3 386 aaPredicted RBP11.05□□□□□ -0.64
NUP54-201ENST00000264883 SGCZQ96LD1 299 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 RTTNQ86VV8 2226 aa11.05□□□□□ -0.64
NUP54-201ENST00000264883 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 LOC102723996A0A087X1L8 192 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 A0A1W2PQM1 296 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 SLC17A3O00476 420 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 ZNF324O75467 553 aaPredicted RBP11.04□□□□□ -0.64
NUP54-201ENST00000264883 S1PR2O95136 353 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 REG1AP05451 166 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 SP9P0CG40 484 aa11.04□□□□□ -0.64
NUP54-201ENST00000264883 ZNF32P17041 273 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms