RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 WDR34Q96EX3 536 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 IGKV1D-16P01601 117 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 SURF2Q15527 256 aaPredicted RBP12.75□□□□□ -0.37
CCDC6-201ENST00000263102 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
CCDC6-201ENST00000263102 SCARF2Q96GP6 870 aaPredicted RBP12.75□□□□□ -0.37
CCDC6-201ENST00000263102 RHOVQ96L33 236 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 HS3ST3B1Q9Y662 390 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 SLC25A20O43772 301 aa12.75□□□□□ -0.37
CCDC6-201ENST00000263102 OR5AN1Q8NGI8 311 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 TRAV24A0A0B4J272 114 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 RPL35AP18077 110 aaKnown RBP12.74□□□□□ -0.37
CCDC6-201ENST00000263102 UNC119Q13432 240 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 ZNF385CQ66K41 422 aaPredicted RBP12.74□□□□□ -0.37
CCDC6-201ENST00000263102 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
CCDC6-201ENST00000263102 ZP3P21754 424 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
CCDC6-201ENST00000263102 NPIPB3Q92617 1050 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 ARPC1AQ92747 370 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 TDGF1P3P51864 188 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 SPSB4Q96A44 273 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 A0A1W2PPV9 198 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 H3BQ15 152 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 HOXA3O43365 443 aaPredicted RBP12.73□□□□□ -0.37
CCDC6-201ENST00000263102 EFEMP2O95967 443 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 HKR1P10072 659 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 C1QTNF12Q5T7M4 302 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 FAM89BQ8N5H3 189 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 OR4D11Q8NGI4 311 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 ZNF729A6NN14 1252 aaPredicted RBP12.73□□□□□ -0.37
CCDC6-201ENST00000263102 RPL39P5Q59GN2 51 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
CCDC6-201ENST00000263102 H3BRM9 83 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 PITX3O75364 302 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 RPS11P62280 158 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC6-201ENST00000263102 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 OR51G1Q8NGK1 321 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 FAM57AQ8TBR7 257 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
CCDC6-201ENST00000263102 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 TMEM167AQ8TBQ9 72 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 SLC25A28Q96A46 364 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 GNLYP22749 145 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 ATP6V0CP27449 155 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 RAB24Q969Q5 203 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 SDF2L1Q9HCN8 221 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 KLK13Q9UKR3 277 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 GAGE10A6NGK3 116 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 CD24P25063 80 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 FAM74A3Q4VXF1 159 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
CCDC6-201ENST00000263102 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 CELA3AP09093 270 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 SCAND1P57086 179 aa12.72□□□□□ -0.37
CCDC6-201ENST00000263102 EGR1P18146 543 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 ICAM4Q14773 271 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 LRRC3BQ96PB8 259 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 A0A1B0GV72 72 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 ZG16O60844 167 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 CD8AP01732 235 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 PAPPA-AS1Q5QFB9 102 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
CCDC6-201ENST00000263102 DPM3Q9P2X0 92 aa12.71□□□□□ -0.37
CCDC6-201ENST00000263102 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 LILRA1O75019 489 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 C18orf15Q96N68 181 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 A0A1W2PQM1 296 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 CDS2O95674 445 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 HOXA6P31267 233 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.38
CCDC6-201ENST00000263102 TRAV40A0A0B4J280 105 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
CCDC6-201ENST00000263102 WDR82Q6UXN9 313 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 SPAG8Q99932 426 aaPredicted RBP12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CNTRLQ7Z7A1 2325 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 K7ERU9 68 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 FABP2P12104 132 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 FAM3BP58499 235 aaPredicted RBP12.7□□□□□ -0.38
CCDC6-201ENST00000263102 KIAA0040Q15053 153 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 TMEM95Q3KNT9 176 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 PET117Q6UWS5 81 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CRHP06850 196 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CD7P09564 240 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 FAM209AQ5JX71 171 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 CHCHD5Q9BSY4 110 aa12.7□□□□□ -0.38
CCDC6-201ENST00000263102 LINC00527Q9UJ94 153 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms