RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 OR5A2Q8NGI9 324 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
XRCC1-201ENST00000262887 PMS2P5A8MQ11 134 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 TOMM40O96008 361 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 KRTDAPP60985 99 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 FBXL7Q9UJT9 491 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 C5orf49A4QMS7 147 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 TIMP3P35625 211 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 SSR4P51571 173 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 CORO2AQ92828 525 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 RNF2Q99496 336 aa12.6□□□□□ -0.39
XRCC1-201ENST00000262887 DIRC3C9JPN6 131 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 S100A7P31151 101 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 SUMO1P63165 101 aaKnown RBP12.59□□□□□ -0.39
XRCC1-201ENST00000262887 SPATA45Q537H7 98 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 FAM58AQ8N1B3 248 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
XRCC1-201ENST00000262887 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 TRBV20OR9-2A0A075B6H5 130 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 RNF212BA8MTL3 300 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 F2Z2F3 143 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 G6PCP35575 357 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 Q0VG73 95 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 OR2D3Q8NGH3 330 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 CHODLQ9H9P2 273 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 UQCR10Q9UDW1 63 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 TRAPPC2LQ9UL33 140 aa12.59□□□□□ -0.39
XRCC1-201ENST00000262887 TRAV9-1A0A075B6T8 112 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 ZG16O60844 167 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 CTRLP40313 264 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 THBS3P49746 956 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 GGNQ86UU5 652 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
XRCC1-201ENST00000262887 TRAV38-1A0A0B4J264 116 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 LRRC30A6NM36 301 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 FCN1O00602 326 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 RAMP3O60896 148 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 IL36BQ9NZH7 164 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 RNF114Q9Y508 228 aa12.58□□□□□ -0.4
XRCC1-201ENST00000262887 A0A096LPE4 126 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 ODAMA1E959 279 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 B3GALT5-AS1P59052 145 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 TMEM249Q2WGJ8 235 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 Q8N976 141 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 OCC1Q8TAD7 63 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 ABHD3Q8WU67 409 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 APOBEC3DQ96AK3 386 aaPredicted RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 QTRT1Q9BXR0 403 aaKnown RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF703Q9H7S9 590 aaPredicted RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 A0A1W2PPV4 95 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 GPX1P07203 203 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 MRPL14Q6P1L8 145 aaKnown RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 MOB1BQ7L9L4 216 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 TXN2Q99757 166 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.57□□□□□ -0.4
XRCC1-201ENST00000262887 LAMTOR2Q9Y2Q5 125 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 M0QZ24 198 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 Q6ZN92 141 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF738Q8NE65 137 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 CADM4Q8NFZ8 388 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 RAB1CQ92928 201 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 STARD4Q96DR4 205 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
XRCC1-201ENST00000262887 SDK2Q58EX2 2172 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
XRCC1-201ENST00000262887 IER3P46695 156 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 HNRNPA3P51991 378 aaKnown RBP12.56□□□□□ -0.4
XRCC1-201ENST00000262887 KRTCAP3Q53RY4 240 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 TBL2Q9Y4P3 447 aaKnown RBP12.56□□□□□ -0.4
XRCC1-201ENST00000262887 COX11Q9Y6N1 276 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 DIDO1Q9BTC0 2240 aaKnown RBP12.56□□□□□ -0.4
XRCC1-201ENST00000262887 TNRC6BQ9UPQ9 1833 aaKnown RBP12.56□□□□□ -0.4
XRCC1-201ENST00000262887 C2CD4DB7Z1M9 353 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 SIRPB1O00241 398 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 SLC17A3O00476 420 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 HYPMO75409 117 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 MMP23AO75900 390 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 NGFP01138 241 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 SRD5A2P31213 254 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 TRIP6Q15654 476 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms