RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SF3B6Q9Y3B4 125 aaKnown RBP11.1□□□□□ -0.63
TTC39A-202ENST00000262676 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 APOMO95445 188 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 VSIG8P0DPA2 414 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 CD300LDQ6UXZ3 194 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
TTC39A-202ENST00000262676 COL4A1P02462 1669 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 WNT9BO14905 357 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 RNASEH2CQ8TDP1 164 aaKnown RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 WIPI2Q9Y4P8 454 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 J3QT63 122 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 TSPAN7P41732 249 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 SERF2P84101 59 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 C10orf128Q5T292 105 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 MDP1Q86V88 176 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 NIT1Q86X76 327 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 DIRC2Q96SL1 478 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 K7N7A8 449 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 CRYBB3P26998 211 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 REG1AP05451 166 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 ABHD17AQ96GS6 310 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 ELF5Q9UKW6 265 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 TRBV7-9A0A0J9YWB2 115 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 A0A1W2PS18 150 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 ZIC1Q15915 447 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 TCF24Q7RTU0 167 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 CENPVQ7Z7K6 275 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 DNASE2BQ8WZ79 361 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 SSBP3Q9BWW4 388 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-202ENST00000262676 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
TTC39A-202ENST00000262676 MEF2BQ02080 365 aaPredicted RBP11.08□□□□□ -0.64
TTC39A-202ENST00000262676 KCNS1Q96KK3 526 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 RBM38Q9H0Z9 239 aaKnown RBP11.08□□□□□ -0.64
TTC39A-202ENST00000262676 LIPT2A6NK58 231 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 RPL31P62899 125 aaKnown RBP11.08□□□□□ -0.64
TTC39A-202ENST00000262676 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 C10orf35Q96D05 121 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 KCNE1BA0A087WTH5 132 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 CD160O95971 181 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
TTC39A-202ENST00000262676 SPCS1Q9Y6A9 102 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 PSG9Q00887 426 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 CCL13Q99616 98 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 C9JCJ5 164 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 NDUFA3O95167 84 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 RPS20P60866 119 aaKnown RBP11.08□□□□□ -0.64
TTC39A-202ENST00000262676 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
TTC39A-202ENST00000262676 A0A0U1RQV5 110 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 LSM6P62312 80 aaKnown RBP11.07□□□□□ -0.64
TTC39A-202ENST00000262676 LCN2P80188 198 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 CDCP2Q5VXM1 449 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 FDCSPQ8NFU4 85 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 FLRT3Q9NZU0 649 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 OR4D11Q8NGI4 311 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 TOMM7Q9P0U1 55 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 GVINP1Q7Z2Y8 2422 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 DPRXA6NFQ7 191 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 OR52M1Q8NGK5 317 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 PSMG3Q9BT73 122 aaPredicted RBP11.07□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF107Q9UII5 783 aaPredicted RBP11.07□□□□□ -0.64
TTC39A-202ENST00000262676 TUBD1Q9UJT1 453 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 IGKV3D-20A0A0C4DH25 116 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 C17orf51A8MQB3 221 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 NPIPB8E9PQR5 432 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 NPIPB9F8W1W9 429 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 NPIPB7O75200 414 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 HBBP68871 147 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF79Q15937 498 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 HOXD4P09016 255 aaPredicted RBP11.07□□□□□ -0.64
TTC39A-202ENST00000262676 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF645Q8N7E2 425 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
TTC39A-202ENST00000262676 EP300Q09472 2414 aaPredicted RBP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 CCL8P80075 99 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms