RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 LOXL1Q08397 574 aaPredicted RBP22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 OR4A4PQ8NGN8 299 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 SAT2Q96F10 170 aaPredicted RBP22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 CLCC1Q96S66 551 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 SMAD7O15105 426 aaKnown RBP22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 SPINT2O43291 252 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 LINC00614P0C842 121 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 SAPCD1Q5SSQ6 148 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 GALMQ96C23 342 aa22.54■■□□□ 1.2
SMARCD3-201ENST00000262188 SEC14L6B5MCN3 397 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 FOXH1O75593 365 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 AMY2AP04746 511 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 ZNF735P0CB33 412 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 OR5H8P0DN80 308 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 VSIG10L2P0DP72 767 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 PPP1CCP36873 323 aaKnown RBP22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 TAS2R46P59540 309 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 GAGE1Q13065 139 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 LPAR3Q9UBY5 353 aa22.53■■□□□ 1.2
SMARCD3-201ENST00000262188 IGHV2-70DA0A0C4DH43 119 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 NPIPB11E5RHQ5 1161 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 LIPFP07098 398 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 CAV2P51636 162 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 OR51S1Q8NGJ8 323 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 OR5R1Q8NH85 324 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 OR2S2Q9NQN1 319 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 NECAP2Q9NVZ3 263 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 AKR1C2P52895 323 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 AKR1C1Q04828 323 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 C11orf88Q6PI97 169 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 Q8N7P7 452 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 CABLES2Q9BTV7 478 aa22.52■■□□□ 1.2
SMARCD3-201ENST00000262188 TPT1P13693 172 aaKnown RBP22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 F2RL1P55085 397 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 LOXL3P58215 753 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 SCGB2B2Q4G0G5 96 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 TRAT1Q6PIZ9 186 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 GAL3ST2Q9H3Q3 398 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 SIRT7Q9NRC8 400 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 IDI2-AS1Q9NZ38 188 aa22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 ZNF107Q9UII5 783 aaPredicted RBP22.51■■□□□ 1.19
SMARCD3-201ENST00000262188 ELOA3CA0A087WX78 387 aaPredicted RBP22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 HSPA12AO43301 675 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 ENSAO43768 121 aaKnown RBP22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 DCAF12L2Q5VW00 463 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 C11orf87Q6NUJ2 197 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 COMMD9Q9P000 198 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 ZNRD1Q9P1U0 126 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 OTOGQ6ZRI0 2925 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 TRBV6-7A0A0A0MS04 114 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 F2RL2O00254 374 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 FPR2P25090 351 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 FCGR2CP31995 323 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 TNFRSF9Q07011 255 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 TMEM249Q2WGJ8 235 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 VAX1Q5SQQ9 334 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 OR10J5Q8NHC4 309 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 MSI2Q96DH6 328 aaKnown RBP22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 GNG12Q9UBI6 72 aa22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 FLNAP21333 2647 aaKnown RBP22.5■■□□□ 1.19
SMARCD3-201ENST00000262188 CREBBPQ92793 2442 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 MED6O75586 246 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 MSMBP08118 114 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 ZNF2Q9BSG1 426 aaPredicted RBP22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 NDUFAF3Q9BU61 184 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 SUCNR1Q9BXA5 334 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 C17orf98A8MV24 154 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 IFNA6P05013 189 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 IGHV4-31P0DP07 118 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 C2orf68Q2NKX9 166 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 HEPN1Q6WQI6 88 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 LINC00574Q9H8X3 128 aa22.49■■□□□ 1.19
SMARCD3-201ENST00000262188 IGHV1-8P0DP01 117 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 AADACP22760 399 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 AARDQ4LEZ3 155 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 ACTBL2Q562R1 376 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 SPNS3Q6ZMD2 512 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 MRGPRFQ96AM1 343 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 TMED3Q9Y3Q3 217 aa22.48■■□□□ 1.19
SMARCD3-201ENST00000262188 TBPP20226 339 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 GNG10P50151 68 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 FXYD4P59646 89 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 POLR3KQ9Y2Y1 108 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 CXorf65A6NEN9 183 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 OR5H14A6NHG9 310 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 ZNF705EA8MWA4 302 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 B4DSR2 109 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 RNASEK-C17orf49H0YIS7 233 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 CD5P06127 495 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 SFTA3P0C7M3 94 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 ZBTB25P24278 435 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 DVL1P1P54792 670 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 KLRD1Q13241 179 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 MEF2DQ14814 521 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 H1FOOQ8IZA3 346 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 UBAC2Q8NBM4 344 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 OR52B4Q8NGK2 314 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 CACFD1Q9UGQ2 172 aa22.47■■□□□ 1.19
SMARCD3-201ENST00000262188 HTD2P86397 168 aa22.46■■□□□ 1.19
SMARCD3-201ENST00000262188 LINC01356Q8N9X3 169 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms