RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 TWSG1Q9GZX9 223 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 PLXNB1O43157 2135 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 EML5Q05BV3 1969 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 IGHV1-45A0A0A0MS14 117 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 IGKV1-6A0A0C4DH72 117 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 RPL39P5Q59GN2 51 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 OR5B3Q8NH48 314 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 CT55Q8WUE5 264 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 CIB3Q96Q77 187 aaPredicted RBP8.57□□□□□ -1.04
PALB2-201ENST00000261584 RALYQ9UKM9 306 aaKnown RBP8.57□□□□□ -1.04
PALB2-201ENST00000261584 TRANK1O15050 2925 aa8.57□□□□□ -1.04
PALB2-201ENST00000261584 TMEM30CPA0ZSE6 113 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 SIAH2O43255 324 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 FOLR2P14207 255 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 NUBP1P53384 320 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 TNFRSF9Q07011 255 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 IGHEP01854 428 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 GZMBP10144 247 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 COX6A1P12074 109 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 MYOD1P15172 320 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 UCP1P25874 307 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 GNG4P50150 75 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 TAS2R60P59551 318 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 Q6ZVH6 145 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 RBMXL3Q8N7X1 1067 aaKnown RBP8.56□□□□□ -1.04
PALB2-201ENST00000261584 OR2D3Q8NGH3 330 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 QTRT1Q9BXR0 403 aaKnown RBP8.56□□□□□ -1.04
PALB2-201ENST00000261584 YLPM1P49750 1951 aaKnown RBP8.56□□□□□ -1.04
PALB2-201ENST00000261584 THADAQ6YHU6 1953 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 DIRC3C9JPN6 131 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 M0R1B8 84 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 KBTBD11O94819 623 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 ORM2P19652 201 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 CRYBB3P26998 211 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 CD1BP29016 333 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 HOXA6P31267 233 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 ID3Q02535 119 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 PLGLAQ15195 96 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 C10orf91Q5T1B1 145 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 KCNE4Q8WWG9 221 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 GTF3AQ92664 365 aaKnown RBP8.56□□□□□ -1.04
PALB2-201ENST00000261584 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 ZNF835Q9Y2P0 537 aa8.56□□□□□ -1.04
PALB2-201ENST00000261584 KLF2Q9Y5W3 355 aaPredicted RBP8.56□□□□□ -1.04
PALB2-201ENST00000261584 UMODP07911 640 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 GZMHP20718 246 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 IL3RAP26951 378 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 MEOX1P50221 254 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 FOXA3P55318 350 aaPredicted RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 FOXO1Q12778 655 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 FAM90A2PQ658T7 463 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 PQLC2Q6ZP29 291 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 ZNRF1Q8ND25 227 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 AP1S3Q96PC3 154 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 ARRDC1-AS1Q9H2J1 176 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 COL4A4P53420 1690 aaPredicted RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 TRAV24A0A0B4J272 114 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 B4DEV8 164 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 RRP8O43159 456 aaKnown RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 HPRT1P00492 218 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 CD46P15529 392 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 MPZP25189 248 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 FKBP2P26885 142 aaKnown RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 ARR3P36575 388 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 GPR6P46095 362 aaPredicted RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 TNFSF10P50591 281 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 MRPL18Q9H0U6 180 aaKnown RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 PRDM13Q9H4Q3 707 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 SEBOXQ9HB31 216 aaPredicted RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 CISD1Q9NZ45 108 aaKnown RBP8.55□□□□□ -1.04
PALB2-201ENST00000261584 FOXJ2Q9P0K8 574 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 PXMP4Q9Y6I8 212 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 IGHV3-72A0A0B4J1Y9 119 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 IGKV1-5P01602 117 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 IL15RAQ13261 267 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 MUC15Q8N387 334 aa8.55□□□□□ -1.04
PALB2-201ENST00000261584 SERF1AO75920 110 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 TEX38Q6PEX7 206 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 SLC24A4Q8NFF2 622 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 TMEM54Q969K7 222 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 RNASE7Q9H1E1 156 aaKnown RBP8.54□□□□□ -1.04
PALB2-201ENST00000261584 IGKV1D-33P01593 117 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 IGKV1-33P01594 117 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
PALB2-201ENST00000261584 STARD6P59095 220 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 RPL30P62888 115 aaKnown RBP8.54□□□□□ -1.04
PALB2-201ENST00000261584 ZNF726P1Q15940 193 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 FBLN5Q9UBX5 448 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 DSPP15924 2871 aaKnown RBP8.54□□□□□ -1.04
PALB2-201ENST00000261584 MARCH11A6NNE9 402 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 TNFSF15O95150 251 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 RPL31P62899 125 aaKnown RBP8.54□□□□□ -1.04
PALB2-201ENST00000261584 C10orf128Q5T292 105 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 TMEM251Q8N6I4 163 aa8.54□□□□□ -1.04
PALB2-201ENST00000261584 OR5P3Q8WZ94 311 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms