RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CNIH2Q6PI25 160 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 ARL9Q6T311 187 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 UBALD2Q8IYN6 164 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 OR8I2Q8N0Y5 310 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 C1orf158Q8N1D5 194 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 COX18Q8N8Q8 333 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF675Q8TD23 568 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PPCDCQ96CD2 204 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 MALSU1Q96EH3 234 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RNF185Q96GF1 192 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PGLYRP3Q96LB9 341 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RNF157Q96PX1 679 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PBDC1Q9BVG4 233 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 SLC25A39Q9BZJ4 359 aaPredicted RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 C20orf27Q9GZN8 174 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 LPAR5Q9H1C0 372 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PRO1933Q9H354 126 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 CDC42EP4Q9H3Q1 356 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 METTL17Q9H7H0 456 aaPredicted RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 TAS2R5Q9NYW4 299 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 IDI2-AS1Q9NZ38 188 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 LAMTOR2Q9Y2Q5 125 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 POLR1DQ9Y2S0 133 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF780BQ9Y6R6 833 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 KDM5AP29375 1690 aaKnown RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MYO5BQ9ULV0 1848 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 TRAV36DV7A0A075B6V5 113 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 A0A087WUU8 490 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 IGKV1D-13A0A0B4J2D9 117 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM269A0A1B0GVZ9 245 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 J3QR89 54 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 TNFSF13O75888 250 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 KCNK2O95069 426 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 APOC3P02656 99 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MT-ND4LP03901 98 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 IGKV1-13P0DP09 117 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 ORM2P19652 201 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 RPS10P46783 165 aaKnown RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 GZMMP51124 257 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 RND2P52198 227 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 CRISP3P54108 245 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 EMP1P54849 157 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 GNG11P61952 73 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 GNA12Q03113 381 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 JOSD1Q15040 202 aaPredicted RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 PEA15Q15121 130 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 ACOT6Q3I5F7 207 aaPredicted RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF429Q86V71 674 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 OR4S1Q8NGB4 309 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 OR10J6PQ8NGY7 276 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 OR5W2Q8NH69 310 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 SLC37A2Q8TED4 501 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 RAB2BQ8WUD1 216 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MBD3L1Q8WWY6 194 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 BORCS7Q96B45 105 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 GALNT14Q96FL9 552 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 LINC00167Q96N53 147 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 OR52B2Q96RD2 323 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 S100A13Q99584 98 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MRPL57Q9BQC6 102 aaKnown RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 OR2J1Q9GZK6 312 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 SH3BGRL3Q9H299 93 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 FBXL15Q9H469 300 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 POPDC3Q9HBV1 291 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 LYRM2Q9NU23 88 aaPredicted RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 UQCC1Q9NVA1 299 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MRPL27Q9P0M9 148 aaKnown RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 PRNDQ9UKY0 176 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 HS3ST2Q9Y278 367 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 KDM6AO15550 1401 aaPredicted RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 TROQ12816 1431 aaPredicted RBP2.82□□□□□ -1.96
CCDC54-201ENST00000261058 NFASCO94856 1347 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MLH3Q9UHC1 1453 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 NRXN1Q9ULB1 1477 aa2.82□□□□□ -1.96
CCDC54-201ENST00000261058 MYH3P11055 1940 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 HFM1A2PYH4 1435 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 PLCH2O75038 1416 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 IGLV1-36A0A0B4J1U3 117 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 TEX50A0A1B0GTY4 177 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 FABP5P3A8MUU1 101 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 INMT-MINDY4F8WBC2 141 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 RPL36A-HNRNPH2H7BZ11 118 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 H7C1H1 209 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 J3QT63 122 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 EDF1O60869 148 aaKnown RBP2.81□□□□□ -1.96
CCDC54-201ENST00000261058 CDRT1O95170 752 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 IL3P08700 152 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR4Q2P0C623 313 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR5G3P0C626 314 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF14P17017 642 aaPredicted RBP2.81□□□□□ -1.96
CCDC54-201ENST00000261058 CDK2P24941 298 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ATP6V0CP27449 155 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 AGTR1P30556 359 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms