RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PRB1P04280 392 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 ERVK-16P61578 105 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 EIF5AP63241 154 aaKnown RBP7.55□□□□□ -1.2
CKAP2-201ENST00000258607 PEA15Q15121 130 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 MST1LQ2TV78 715 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 TIMM23BQ5SRD1 257 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 ASCL4Q6XD76 172 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 SVBPQ8N300 66 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 C22orf15Q8WYQ4 148 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 DHRS9Q9BPW9 319 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 RIMS4Q9H426 269 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-201ENST00000258607 SLC39A9Q9NUM3 307 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 ONECUT1Q9UBC0 465 aa7.55□□□□□ -1.2
CKAP2-201ENST00000258607 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-201ENST00000258607 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
CKAP2-201ENST00000258607 DLL1O00548 723 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 CTXN2P0C2S0 81 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 RPS10P46783 165 aaKnown RBP7.54□□□□□ -1.2
CKAP2-201ENST00000258607 CASP6P55212 293 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 ARF6P62330 175 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 ADIRFQ15847 76 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 GALNT14Q96FL9 552 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 PKIBQ9C010 78 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 PLEKHA2Q9HB19 425 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 TNFRSF19Q9NS68 423 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 IL36GQ9NZH8 169 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 FBN2P35556 2912 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 WNT2P09544 360 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 UCP1P25874 307 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 RAB13P51153 203 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 WDR25Q64LD2 544 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 FAM103A1Q9BTL3 118 aaKnown RBP7.54□□□□□ -1.2
CKAP2-201ENST00000258607 A8MXK9 166 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 CGAP01215 116 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 COX5AP20674 150 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 GLRXP35754 106 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF266Q14584 549 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 RTP5Q14D33 572 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 ADIPOQQ15848 244 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 KRTAP27-1Q3LI81 207 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 SSX7Q7RTT5 188 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 Q8IYB0 196 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 PNKDQ8N490 385 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 OR4D5Q8NGN0 318 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
CKAP2-201ENST00000258607 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-201ENST00000258607 SAA2-SAA4A0A096LPE2 208 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 H0Y980 276 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 RRHO14718 337 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 SNAPC5O75971 98 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 IGLV2-14P01704 120 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 S100A6P06703 90 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 OR10J4P0C629 311 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 SAA2P0DJI9 122 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 SLC25A6P12236 298 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 P2RY1P47900 373 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 NMSQ5H8A3 153 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 FFAR4Q5NUL3 377 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF880Q6PDB4 577 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 PPP1R35Q8TAP8 253 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MYOZ1Q9NP98 299 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 CACFD1Q9UGQ2 172 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 TAGLN2P37802 199 aaKnown RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 SNCAP37840 140 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ECI1P42126 302 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 PAX9P55771 341 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 IL13RA2Q14627 380 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 PDLIM3Q53GG5 364 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 OR10P1Q8NGE3 313 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 OR4F5Q8NH21 305 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 OR4F4Q96R69 305 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 GSX1Q9H4S2 264 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 UBTD1Q9HAC8 227 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ENY2Q9NPA8 101 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 PROP1O75360 226 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ZNF146Q15072 292 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 NRN1LQ496H8 165 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ASCL2Q99929 193 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 NUDT16L1Q9BRJ7 211 aaKnown RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 MMP26Q9NRE1 261 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 ANAPC10Q9UM13 185 aa7.53□□□□□ -1.2
CKAP2-201ENST00000258607 STRAPQ9Y3F4 350 aaKnown RBP7.53□□□□□ -1.2
CKAP2-201ENST00000258607 TEX15Q9BXT5 2789 aa7.52□□□□□ -1.2
CKAP2-201ENST00000258607 HLA-GP17693 338 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 ERVK11-1P61568 191 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 RND3P61587 244 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 SLC35B1P78383 322 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms