RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TCF19Q9Y242 345 aa16.18■□□□□ 0.18
PTPRE-201ENST00000254667 PSME4Q14997 1843 aa16.18■□□□□ 0.18
PTPRE-201ENST00000254667 MT-ND6P03923 174 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 CD40P25942 277 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 ZNF818PQ6ZRF7 136 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 TMEM189A5PLL7 270 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 S1PR2O95136 353 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 FAM106AQ4KMX7 169 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 CYB561D1Q8N8Q1 229 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 RGP1Q92546 391 aaPredicted RBP16.17■□□□□ 0.18
PTPRE-201ENST00000254667 AKIRIN1Q9H9L7 192 aaPredicted RBP16.17■□□□□ 0.18
PTPRE-201ENST00000254667 CEP290O15078 2479 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 TM4SF5O14894 197 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 PTBP3O95758 552 aaKnown RBP16.17■□□□□ 0.18
PTPRE-201ENST00000254667 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 ACP7Q6ZNF0 438 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 MYOZ3Q8TDC0 251 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 NEU4Q8WWR8 484 aaPredicted RBP16.17■□□□□ 0.18
PTPRE-201ENST00000254667 OR4C12Q96R67 309 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 CCL19Q99731 98 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 DNAJC4Q9NNZ3 241 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 TMEM56-RWDD3S4R434 201 aa16.17■□□□□ 0.18
PTPRE-201ENST00000254667 APC2O95996 2303 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 EFEMP2O95967 443 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 RNF151Q2KHN1 245 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 DRAM1Q8N682 238 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 TMEM106BQ9NUM4 274 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 PATJQ8NI35 1801 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 TPRP12270 2363 aaKnown RBP16.16■□□□□ 0.18
PTPRE-201ENST00000254667 PSG9Q00887 426 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 ZNF660Q6AZW8 331 aaPredicted RBP16.16■□□□□ 0.18
PTPRE-201ENST00000254667 RHBDL1O75783 438 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 SGMS2Q8NHU3 365 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 PACRGQ96M98 296 aaPredicted RBP16.16■□□□□ 0.18
PTPRE-201ENST00000254667 PPOXP50336 477 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 CRYBA2P53672 197 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 ACSF3Q4G176 576 aaPredicted RBP16.16■□□□□ 0.18
PTPRE-201ENST00000254667 TM4SF20Q53R12 229 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 LAMTOR1Q6IAA8 161 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 FAM90A1Q86YD7 464 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 CDC42EP3Q9UKI2 254 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 CKAP5Q14008 2032 aa16.16■□□□□ 0.18
PTPRE-201ENST00000254667 RPL7P18124 248 aaKnown RBP16.15■□□□□ 0.18
PTPRE-201ENST00000254667 MIC13Q5XKP0 118 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 POC1AQ8NBT0 407 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ZNF236Q9UL36 1845 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 IGLV3-32A0A0A0MS00 114 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 NMBP08949 121 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 C8orf88P0DMB2 117 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 MEOX2P50222 304 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.15■□□□□ 0.18
PTPRE-201ENST00000254667 LINC01560Q8TB33 94 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 TLNRD1Q9H1K6 362 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 BET1LQ9NYM9 111 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 TMSB15BA0A087X1C1 80 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 NPIPB11E5RHQ5 1161 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 KIR2DL2P43627 348 aaPredicted RBP16.15■□□□□ 0.18
PTPRE-201ENST00000254667 OR52M1Q8NGK5 317 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 FLVCR1-AS1Q8TAF5 88 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ABHD17AQ96GS6 310 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 VPS25Q9BRG1 176 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 KCNAB3O43448 404 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 SLC16A13Q7RTY0 426 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 PNKDQ8N490 385 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 CHODLQ9H9P2 273 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ZG16O60844 167 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 NDUFB4O95168 129 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ZFP36L1Q07352 338 aaKnown RBP16.15■□□□□ 0.18
PTPRE-201ENST00000254667 FAM27E3Q08E93 113 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 ABLIM2Q6H8Q1 611 aa16.15■□□□□ 0.18
PTPRE-201ENST00000254667 DNAJC13O75165 2243 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 TBX6O95947 436 aaPredicted RBP16.14■□□□□ 0.17
PTPRE-201ENST00000254667 ATP5G2Q06055 141 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 TRIOBPQ9H2D6 2365 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 MFAP2P55001 183 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 PGPA6NDG6 321 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 AREGP15514 252 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 SYT8Q8NBV8 401 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 ZNF738Q8NE65 137 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 WDYHV1Q96HA8 205 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 TDRD6O60522 2096 aaKnown RBP16.14■□□□□ 0.17
PTPRE-201ENST00000254667 C1QTNF12Q5T7M4 302 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 C19orf48Q6RUI8 117 aa16.14■□□□□ 0.17
PTPRE-201ENST00000254667 REPIN1Q9BWE0 567 aaKnown RBP16.14■□□□□ 0.17
PTPRE-201ENST00000254667 MRPL32Q9BYC8 188 aaKnown RBP16.14■□□□□ 0.17
PTPRE-201ENST00000254667 MYOFQ9NZM1 2061 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 CD81P60033 236 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 NCMAPQ5T1S8 102 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 IBA57Q5T440 356 aaKnown RBP16.13■□□□□ 0.17
PTPRE-201ENST00000254667 HSPB7Q9UBY9 170 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 SSTR5P35346 364 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 IGKV1D-43A0A0B4J1Z2 117 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 A0A0G2JMM0 328 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 A0A1W2PPB8 328 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 A0A1W2PRS3 328 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 KIR3DP1A8MWS1 328 aa16.13■□□□□ 0.17
PTPRE-201ENST00000254667 RPL29P47914 159 aaKnown RBP16.13■□□□□ 0.17
PTPRE-201ENST00000254667 RPS20P60866 119 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms