RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TNFRSF9Q07011 255 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GUSBP1Q15486 140 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 HLA-DRB5Q30154 266 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SMIM21Q3B7S5 101 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 CDCP2Q5VXM1 449 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF645Q8N7E2 425 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SLC24A4Q8NFF2 622 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 DYNLRB2Q8TF09 96 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 OR4C12Q96R67 309 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PYGO2Q9BRQ0 406 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 CDC42EP3Q9UKI2 254 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 BCL3P20749 454 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RPL29P47914 159 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GPM6AP51674 278 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ARF1P84077 181 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RUNX1Q01196 453 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PSMG4Q5JS54 123 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF818PQ6ZRF7 136 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 MYPOPQ86VE0 399 aaPredicted RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RDH5Q92781 318 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 TBX15Q96SF7 602 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 MRPL37Q9BZE1 423 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SLC25A22Q9H936 323 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 KLF13Q9Y2Y9 288 aaPredicted RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 HS3ST3B1Q9Y662 390 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 C5orf49A4QMS7 147 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 H3BP45 60 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 CXCL1P09341 107 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 EDN3P14138 238 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GPR12P47775 334 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 BPIFB3P59826 476 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PSG4Q00888 419 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 COL10A1Q03692 680 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ACTL10Q5JWF8 245 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 DHRS13Q6UX07 377 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 TECRQ9NZ01 308 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RNF24Q9Y225 148 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ALPK2Q86TB3 2170 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 A8MWP6 167 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PROB1E7EW31 1015 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SIRPB1O00241 398 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 HS3ST1O14792 307 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PAGE4O60829 102 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SNCGO76070 127 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 NAPSAO96009 420 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 NGFP01138 241 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 AMBPP02760 352 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PSG2P11465 335 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PMCHP20382 165 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 BMP5P22003 454 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 FAM90A2PQ658T7 463 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 TGIF2LXQ8IUE1 241 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GBGT1Q8N5D6 347 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GUCD1Q96NT3 240 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PCGF1Q9BSM1 259 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 RBKSQ9H477 322 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF581Q9P0T4 197 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 FCN1O00602 326 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 TNFSF13O75888 250 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF343Q6P1L6 599 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 GUSBP11Q6P575 273 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF880Q6PDB4 577 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 OR51G1Q8NGK1 321 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 OR2Y1Q8NGV0 311 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 OR10D3Q8NH80 312 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 CCDC74BQ96LY2 380 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 S1PR3Q99500 378 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 C20orf144Q9BQM9 153 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 WNT5BQ9H1J7 359 aa3.52□□□□□ -1.85
UBE4A-201ENST00000252108 SEPSECSQ9HD40 501 aaKnown RBP3.52□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV1-12A0A0C4DH73 117 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 SHISA8B8ZZ34 492 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 EREGO14944 169 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 TMPRSS2O15393 492 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV1D-12P01611 117 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 SOD3P08294 240 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 GNG4P50150 75 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 NUBP1P53384 320 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 RELQ04864 619 aaPredicted RBP3.51□□□□□ -1.85
UBE4A-201ENST00000252108 EIF4EBP1Q13541 118 aaPredicted RBP3.51□□□□□ -1.85
UBE4A-201ENST00000252108 LY6DQ14210 128 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 HERPUD1Q15011 391 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 BATFQ16520 125 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 SNAI3Q3KNW1 292 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF468Q5VIY5 522 aaPredicted RBP3.51□□□□□ -1.85
UBE4A-201ENST00000252108 RASL11AQ6T310 242 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF837Q96EG3 531 aaPredicted RBP3.51□□□□□ -1.85
UBE4A-201ENST00000252108 SLC35E1Q96K37 410 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 RHOVQ96L33 236 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF385AQ96PM9 386 aaKnown RBP3.51□□□□□ -1.85
UBE4A-201ENST00000252108 OR2V2Q96R30 315 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 TRIB1Q96RU8 372 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 RSG1Q9BU20 258 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 SRXN1Q9BYN0 137 aa3.51□□□□□ -1.85
UBE4A-201ENST00000252108 IL36BQ9NZH7 164 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms