RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.47□□□□□ -0.734e-10■■■■■ 35.8
LSM8-201ENST00000249299 SPNS3Q6ZMD2 512 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
LSM8-201ENST00000249299 SELENOHQ8IZQ5 122 aaKnown RBP10.47□□□□□ -0.73
LSM8-201ENST00000249299 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 OR5M8Q8NGP6 311 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 PPP1R14BQ96C90 147 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 SPIN2AQ99865 258 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 SPIN2BQ9BPZ2 258 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 WASHC3Q9Y3C0 194 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.73
LSM8-201ENST00000249299 IGHV1-3A0A0C4DH29 117 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 FCGR3BO75015 233 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 HRASP01112 189 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.73
LSM8-201ENST00000249299 NQO2P16083 231 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.73
LSM8-201ENST00000249299 DYNLT3P51808 116 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 KLRD1Q13241 179 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 FCN2Q15485 313 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 AANATQ16613 207 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 TMEM177Q53S58 311 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 GSG1LQ6UXU4 331 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 AKAP14Q86UN6 197 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 UXS1Q8NBZ7 420 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 RRNAD1Q96FB5 475 aaKnown RBP10.46□□□□□ -0.73
LSM8-201ENST00000249299 MRPL20Q9BYC9 149 aaKnown RBP10.46□□□□□ -0.73
LSM8-201ENST00000249299 SLC35D1Q9NTN3 355 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 COA4Q9NYJ1 87 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 ZNRD1Q9P1U0 126 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 MGAT4CQ9UBM8 478 aa10.46□□□□□ -0.73
LSM8-201ENST00000249299 A0A1B0GU03 582 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 A0A1W2PPI3 338 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 CD5LO43866 347 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 SAA4P35542 130 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 LPAR6P43657 344 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 RAP2BP61225 183 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 EBI3Q14213 229 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 NMSQ5H8A3 153 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 THNSL2Q86YJ6 484 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 DRAXINQ8NBI3 349 aaPredicted RBP10.45□□□□□ -0.74
LSM8-201ENST00000249299 OR11H7Q8NGC8 314 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 LHFPL5Q8TAF8 219 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 NANPQ8TBE9 248 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
LSM8-201ENST00000249299 SEC22AQ96IW7 307 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 C2orf50Q96LR7 162 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 GPHA2Q96T91 129 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 NMES1Q9C002 83 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 ZNF436Q9C0F3 470 aaPredicted RBP10.45□□□□□ -0.74
LSM8-201ENST00000249299 MEGF9Q9H1U4 602 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 ZFP57Q9NU63 452 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 MMP24Q9Y5R2 645 aa10.45□□□□□ -0.74
LSM8-201ENST00000249299 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
LSM8-201ENST00000249299 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 RAMP3O60896 148 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 PFDN1O60925 122 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 CCNKO75909 580 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 FSHBP01225 129 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 P0C879 139 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 FOSL1P15407 271 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 BRS3P32247 399 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 DLX1P56177 255 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 ERVK-16P61578 105 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 LDLRAD2Q5SZI1 272 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 GGNBP1Q5YKI7 109 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 TCTE3Q8IZS6 198 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 MAPK1IP1LQ8NDC0 245 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 NEURL2Q9BR09 285 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 VPS13CQ709C8 3753 aa10.44□□□□□ -0.74
LSM8-201ENST00000249299 TRAV40A0A0B4J280 105 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 GOSR2O14653 212 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 SNAPC5O75971 98 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 SPDEFO95238 335 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 CRYZL1O95825 349 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 IGKV1-39P01597 117 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 IGKV1D-39P04432 117 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 CXCL3P19876 107 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 REG1BP48304 166 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 AKR1C2P52895 323 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 H2BFSP57053 126 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 FGL1Q08830 312 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 MOB3BQ86TA1 216 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 CIARTQ8N365 385 aaPredicted RBP10.43□□□□□ -0.74
LSM8-201ENST00000249299 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 OR4A5Q8NH83 315 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 CFHR4Q92496 578 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 AJUBAQ96IF1 538 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 RHOVQ96L33 236 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 TSNAXQ99598 290 aaKnown RBP10.43□□□□□ -0.74
LSM8-201ENST00000249299 NUP50Q9UKX7 468 aa10.43□□□□□ -0.74
LSM8-201ENST00000249299 WNK2Q9Y3S1 2297 aa10.42□□□□□ -0.74
LSM8-201ENST00000249299 CSMD1Q96PZ7 3565 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms