RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 DEFA6Q01524 100 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 ECSCRQ19T08 205 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 ZNF66Q6ZN08 573 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 ZBTB34Q8NCN2 500 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 BORCS5Q969J3 196 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 RCC1LQ96I51 464 aaKnown RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 FOXA2Q9Y261 457 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-201ENST00000248948 FBXO7Q9Y3I1 522 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 NOTCH3Q9UM47 2321 aa9.99□□□□□ -0.81
VPREB3-201ENST00000248948 G3V318 75 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 G3V4G9 280 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 HPGDSO60760 199 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 TPPPO94811 219 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 CRYZL1O95825 349 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 CRYGBP07316 175 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 ELK1P19419 428 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 AADACP22760 399 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 MYCNOSP40205 109 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 TMBIM6P55061 237 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 UBE2KP61086 200 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 TMEM267Q0VDI3 215 aaPredicted RBP9.98□□□□□ -0.81
VPREB3-201ENST00000248948 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 OR5M8Q8NGP6 311 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 OR4S2Q8NH73 311 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 ABHD5Q8WTS1 349 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 GIMAP1Q8WWP7 306 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 UBE2E2Q96LR5 201 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 P2RX4Q99571 388 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 EHFQ9NZC4 300 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
VPREB3-201ENST00000248948 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
VPREB3-201ENST00000248948 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 TNCP24821 2201 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 A0A1W2PN81 502 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 MEIS3P1A6NDR6 274 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 J3QRK9 145 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 SULT1C2O00338 296 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 FCN1O00602 326 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 RCVRNP35243 200 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 CHRNA7P36544 502 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 KIR2DS2P43631 304 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 HERV-K104P61576 105 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 SSBP2P81877 361 aaPredicted RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 DYRK1AQ13627 763 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 TMEM65Q6PI78 240 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 CLVS1Q8IUQ0 354 aaPredicted RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 TEX45Q8NA69 505 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 OR5H2Q8NGV7 314 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 TCTEX1D2Q8WW35 142 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
VPREB3-201ENST00000248948 NUBP2Q9Y5Y2 271 aa9.97□□□□□ -0.81
VPREB3-201ENST00000248948 H3BUA1 57 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 SOX15O60248 233 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 FCGR3BO75015 233 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.82
VPREB3-201ENST00000248948 RPL30P62888 115 aaKnown RBP9.96□□□□□ -0.82
VPREB3-201ENST00000248948 RUNX1Q01196 453 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 CATR1Q13166 79 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 FHL3Q13643 280 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 FXYD3Q14802 87 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 ACTBL2Q562R1 376 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 C18orf65Q6ZTR6 163 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 C1QL4Q86Z23 238 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 GRPEL2Q8TAA5 225 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 C15orf40Q8WUR7 153 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 MOB3AQ96BX8 217 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 TMEM68Q96MH6 324 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 CLCC1Q96S66 551 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 MCRIP2Q9BUT9 160 aaKnown RBP9.96□□□□□ -0.82
VPREB3-201ENST00000248948 SLC5A7Q9GZV3 580 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 SLA2Q9H6Q3 261 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 VSIG4Q9Y279 399 aa9.96□□□□□ -0.82
VPREB3-201ENST00000248948 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FAM25AB3EWG3 89 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FAM25CB3EWG5 89 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FAM25GB3EWG6 89 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 CCL24O00175 119 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 ARPC1BO15143 372 aaKnown RBP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FCER2P06734 321 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 SAA1P0DJI8 122 aaPredicted RBP9.95□□□□□ -0.82
VPREB3-201ENST00000248948 CD40LGP29965 261 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 RAB9AP51151 201 aa9.95□□□□□ -0.82
VPREB3-201ENST00000248948 FXYD4P59646 89 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms