RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TUBD1Q9UJT1 453 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TMEM91Q6ZNR0 172 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 GUCD1Q96NT3 240 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TMEM106BQ9NUM4 274 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 DLX6P56179 175 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 DSCR9P59020 149 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 CLDND2Q8NHS1 167 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 RALGAPA2Q2PPJ7 1873 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 NUDT3O95989 172 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 CYB5R3P00387 301 aaPredicted RBP6.3□□□□□ -1.4
SSR1-201ENST00000244763 GPX1P07203 203 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 CELA2AP08217 269 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 OSR1Q8TAX0 266 aaPredicted RBP6.3□□□□□ -1.4
SSR1-201ENST00000244763 IGLV1-36A0A0B4J1U3 117 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 MFAP2P55001 183 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 MYOD1P15172 320 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TCL1AP56279 114 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 PLAURQ03405 335 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 TAF15Q92804 592 aaKnown RBP eCLIP6.3□□□□□ -1.4
SSR1-201ENST00000244763 OR51M1Q9H341 326 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 V9GYH0 126 aa6.3□□□□□ -1.4
SSR1-201ENST00000244763 SLC25A17O43808 307 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 PGLYRP1O75594 196 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 CEBPDP49716 269 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 GZMMP51124 257 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 CMC4P56277 68 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 FXYD3Q14802 87 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 GATAD1Q8WUU5 269 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 SPSB4Q96A44 273 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 SNAI3Q3KNW1 292 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ACSF3Q4G176 576 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 SMUG1Q53HV7 270 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 LEMD1Q68G75 181 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 TMEM252Q8N6L7 170 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 MEGF10Q96KG7 1140 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ZNF488Q96MN9 340 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ARID2Q68CP9 1835 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 NPFFO15130 113 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IL11P20809 199 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 PMCHL1Q16048 86 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ZIC4Q8N9L1 334 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 LHFPL5Q8TAF8 219 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 RAB37Q96AX2 223 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ZNF256Q9Y2P7 627 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 IGHV3OR16-12A0A075B7B8 117 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IFITM10A6NMD0 228 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 H3BQ15 152 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 HLA-DQA1P01909 254 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 ANOS1P23352 680 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 SUCLG1P53597 346 aaKnown RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 AWAT1Q58HT5 328 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 GEMIN7Q9H840 131 aaKnown RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 LRRC37AA6NMS7 1700 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 KBTBD11O94819 623 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 PPP1R32Q7Z5V6 425 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 HDHD3Q9BSH5 251 aaPredicted RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 RBKSQ9H477 322 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IGKV3-11P04433 115 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 PSMG4Q5JS54 123 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 KLK13Q9UKR3 277 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 GPR132Q9UNW8 380 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 TRBV9A0A0B4J1U6 114 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IGHV3-72A0A0B4J1Y9 119 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 GDF9O60383 454 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 HSPB1P04792 205 aaKnown RBP6.29□□□□□ -1.4
SSR1-201ENST00000244763 TNFRSF9Q07011 255 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 TPRX1Q8N7U7 411 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 SGMS2Q8NHU3 365 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 NPFFR1Q9GZQ6 430 aa6.29□□□□□ -1.4
SSR1-201ENST00000244763 IGHV3-21A0A0B4J1V1 117 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 RECKO95980 971 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 TRGV3P03979 118 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 BCL2P10415 239 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 LY6EQ16553 131 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 IGSF11Q5DX21 431 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 FAM206AQ9NX38 181 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 LHFPL6Q9Y693 200 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 CBY3A6NI87 242 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 MARCH11A6NNE9 402 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
SSR1-201ENST00000244763 IER3P46695 156 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 GGACTQ9BVM4 153 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 SBF1O95248 1867 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 SSTR5P35346 364 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 SMIM8Q96KF7 97 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 TMSB15BA0A087X1C1 80 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 A0A1W2PPE3 182 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 ZNF385CQ66K41 422 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms