RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MTCL1Q9Y4B5 1905 aaKnown RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 A0A0G2JK05 382 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 LMO7DNF2Z398 122 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 PSG4Q00888 419 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 SPEM2Q0P670 501 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 RIGQ13278 110 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 DMRTC2Q8IXT2 367 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 TMEM56Q96MV1 263 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 G6PC2Q9NQR9 355 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 ASPHD2Q6ICH7 369 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 VSIRQ9H7M9 311 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 AGRNO00468 2067 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 GAPDHP04406 335 aaKnown RBP6.46□□□□□ -1.37
RIF1-201ENST00000243326 MCRIP2Q9BUT9 160 aaKnown RBP6.46□□□□□ -1.37
RIF1-201ENST00000243326 CD55P08174 381 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 TRBV5-7A0A0A0MS05 114 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 TRBV5-5A0A0J9YX44 114 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 TMEM210A6NLX4 147 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 C1QTNF9P0C862 333 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 ADMP35318 185 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 RPS23P62266 143 aaKnown RBP6.46□□□□□ -1.37
RIF1-201ENST00000243326 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 IGKV1D-42A0A075B6H8 117 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 A0A1B0GUS0 222 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 S1PR2O95136 353 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 GCGP01275 180 aa6.46□□□□□ -1.37
RIF1-201ENST00000243326 METTL1Q9UBP6 276 aaKnown RBP6.46□□□□□ -1.37
RIF1-201ENST00000243326 IGLV1-36A0A0B4J1U3 117 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 HOXA4Q00056 320 aaPredicted RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 RPL39P5Q59GN2 51 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 THYN1Q9P016 225 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 HSPB7Q9UBY9 170 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 TBX21Q9UL17 535 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 ZNF236Q9UL36 1845 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 TGFBR3LH3BV60 316 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 SRP14P37108 136 aaKnown RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 ATP6V1FQ16864 119 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 CENPWQ5EE01 88 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 IBA57Q5T440 356 aaKnown RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 UBALD2Q8IYN6 164 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 FCARP24071 287 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 OR4S2Q8NH73 311 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 MRPL13Q9BYD1 178 aaKnown RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 RNF144BQ7Z419 303 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 NOTCH2Q04721 2471 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 IGHV1OR15-9A0A0B4J2B8 117 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 RNF222A6NCQ9 220 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 TMEM127O75204 238 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 LCNL1Q6ZST4 164 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 UQCR10Q9UDW1 63 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 K7ERU9 68 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 ASAH2BP0C7U1 165 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 MEF2BQ02080 365 aaPredicted RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 NAAAQ02083 359 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 SLC25A53Q5H9E4 307 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 PGPA6NDG6 321 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 DANCRP0C864 163 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 SLC25A30Q5SVS4 291 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 SLC22A18ASQ8N1D0 253 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 UBTD1Q9HAC8 227 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 LHFPL6Q9Y693 200 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 CGAP01215 116 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 H1FOOQ8IZA3 346 aaPredicted RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 CPEB3Q8NE35 698 aaKnown RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 OR4C13Q8NGP0 309 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 APOBEC4Q8WW27 367 aaKnown RBP6.46□□□□□ -1.38
RIF1-201ENST00000243326 RNF122Q9H9V4 155 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
RIF1-201ENST00000243326 OOEPA6NGQ2 149 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 NUDT3O95989 172 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 CXCL1P09341 107 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TMEM187Q14656 261 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 MEGF9Q9H1U4 602 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 UBE2ZQ9H832 354 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 HPRT1P00492 218 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 MBNL2Q5VZF2 373 aaKnown RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 TMEM222Q9H0R3 208 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TDRD15B5MCY1 1934 aaKnown RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 AMY1AP04745 511 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 SRP19P09132 144 aaKnown RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 KLF3P57682 345 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 WFDC12Q8WWY7 111 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TAF15Q92804 592 aaKnown RBP eCLIP6.45□□□□□ -1.38
RIF1-201ENST00000243326 ADTRPQ96IZ2 230 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 HARBI1Q96MB7 349 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 DSPPQ9NZW4 1301 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 A0A0J9YW62 118 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 QSER1Q2KHR3 1735 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 FOXS1O43638 330 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 PGLYRP1O75594 196 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 CYC1P08574 325 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 RNASE7Q9H1E1 156 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms