RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SFT2D2O95562 160 aa9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 DEFA4P12838 97 aa9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 HOXA1P49639 335 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 FAM53AQ6NSI3 398 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 RHOVQ96L33 236 aa9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 METTL1Q9UBP6 276 aaKnown RBP9.06□□□□□ -0.96
TNFAIP3-201ENST00000237289 TLN2Q9Y4G6 2542 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 A0A0U1RQK1 487 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 SNRNP70P08621 437 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 TNXAQ16473 311 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 ADAD2Q8NCV1 583 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 RBPMSQ93062 196 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 RSRP1Q9BUV0 290 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 IFI27L2Q9H2X8 130 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 CD83Q01151 205 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 CYYR1Q96J86 154 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 FKBP11Q9NYL4 201 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 CACFD1Q9UGQ2 172 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 DHRS2Q13268 280 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 KHDC1LQ5JSQ8 128 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 SLC25A42Q86VD7 318 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 RAI1Q7Z5J4 1906 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-201ENST00000237289 H0Y980 276 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 SLC25A17O43808 307 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 PET100P0DJ07 73 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 OR4P4Q8NGL7 312 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 UNKLQ9H9P5 680 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 TRIM77I1YAP6 450 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 MED6O75586 246 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 RPP30P78346 268 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 TMEM267Q0VDI3 215 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 TCF23Q7RTU1 214 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 C8orf31Q8N9H6 132 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 OSR1Q8TAX0 266 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 THAP6Q8TBB0 222 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 C5orf66Q9H5L9 145 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 HEYLQ9NQ87 328 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 ANAPC10Q9UM13 185 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 C9orf170A2RU37 121 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 G6PCP35575 357 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 ZNF134P52741 427 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 LIAT1Q6ZQX7 453 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 DNM1P46Q6ZS02 220 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 GRPEL2Q8TAA5 225 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 M0QZK8 103 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 IL5P05113 134 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 CGB3P0DN86 165 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 CGB7P0DN87 165 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 CD1BP29016 333 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 DUSP18Q8NEJ0 188 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 OR52B4Q8NGK2 314 aa9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-201ENST00000237289 NAV3Q8IVL0 2385 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 SULT1A3P0DMM9 295 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 SULT1A4P0DMN0 295 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 LY6G6FQ5SQ64 297 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 LRRC20Q8TCA0 184 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 SMR3AQ99954 134 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 SONP18583 2426 aaKnown RBP9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 ZNF735P0CB33 412 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 PAX6P26367 422 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 RAG2P55895 527 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 DLX6P56179 175 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 ERHP84090 104 aaKnown RBP9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 IFITM3Q01628 133 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 ALG5Q9Y673 324 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 ADGRG4Q8IZF6 3080 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 NXPH3O95157 252 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 RND3P61587 244 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 MMD2Q8IY49 270 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 NABP2Q9BQ15 211 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 UNC79Q9P2D8 2635 aa9.03□□□□□ -0.96
TNFAIP3-201ENST00000237289 CRYM-AS1A6NIL9 109 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 SNRPGP15A8MWD9 76 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 INAFM1C9JVW0 142 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 OPN1MWP04001 364 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 VDAC1P21796 283 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 SIGLECL1Q8N7X8 197 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms