RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 ELNP15502 786 aa11.02□□□□□ -0.64
VAMP4-201ENST00000236192 ZNF542PQ5EBM4 170 aa11.02□□□□□ -0.64
VAMP4-201ENST00000236192 DCAF12Q5T6F0 453 aa11.02□□□□□ -0.64
VAMP4-201ENST00000236192 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.64
VAMP4-201ENST00000236192 COMMD5Q9GZQ3 224 aa11.02□□□□□ -0.64
VAMP4-201ENST00000236192 PSMB11A5LHX3 300 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 MZT1Q08AG7 82 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF418Q8TF45 676 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-201ENST00000236192 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 IGKV1D-42A0A075B6H8 117 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 LYPD3O95274 346 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 NAPSAO96009 420 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 ASPHD2Q6ICH7 369 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 OCIAD1Q9NX40 245 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 PILRBQ9UKJ0 227 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 LOC389332A0A1B0GUA5 103 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 hDV102S1A0JD36 115 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 CRYBA4P53673 196 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 YPEL3P61236 119 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-201ENST00000236192 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-201ENST00000236192 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 LRRC37AA6NMS7 1700 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 MRPL33O75394 65 aaKnown RBP11.01□□□□□ -0.65
VAMP4-201ENST00000236192 CA6P23280 308 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 BVES-AS1Q5T3Y7 98 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 OR5AS1Q8N127 324 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 TTC9CQ8N5M4 171 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 TMEM30CPA0ZSE6 113 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 CA3P07451 260 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 SSBP3Q9BWW4 388 aaPredicted RBP11.01□□□□□ -0.65
VAMP4-201ENST00000236192 HES4Q9HCC6 221 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 J3QR06 171 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 OR2J3O76001 311 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 APOBEC3AP31941 199 aaPredicted RBP11.01□□□□□ -0.65
VAMP4-201ENST00000236192 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
VAMP4-201ENST00000236192 TPRX1Q8N7U7 411 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 OR2Z1Q8NG97 314 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 CEACAM18A8MTB9 384 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 SAP30O75446 220 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 SCTP09683 121 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 PRSS41Q7RTY9 318 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 PYGO2Q9BRQ0 406 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
VAMP4-201ENST00000236192 SERGEFQ9UGK8 458 aa11.01□□□□□ -0.65
VAMP4-201ENST00000236192 FCGR3BO75015 233 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 REG1AP05451 166 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 GPR6P46095 362 aaPredicted RBP11□□□□□ -0.65
VAMP4-201ENST00000236192 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 DOCK5Q9H7D0 1870 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 LOC101059948A0A1B0GTJ6 334 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 C3orf80F5H4A9 247 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 G3V4G9 280 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 P04436 131 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 TMEM177Q53S58 311 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 SHISA6Q6ZSJ9 500 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 C5orf24Q7Z6I8 188 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
VAMP4-201ENST00000236192 GPHA2Q96T91 129 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 TMEM140Q9NV12 185 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 HCSTQ9UBK5 93 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 PIKFYVEQ9Y2I7 2098 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
VAMP4-201ENST00000236192 PSG3Q16557 428 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 MYOZ3Q8TDC0 251 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 STRCQ7RTU9 1775 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 A0A1W2PQD3 144 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 GNB1P62873 340 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 MESP2Q0VG99 397 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 ZP4Q12836 540 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 DEFB125Q8N687 156 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 UBALD1Q8TB05 177 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 SIGLEC12Q96PQ1 595 aa11□□□□□ -0.65
VAMP4-201ENST00000236192 TRAV26-1A0A087WT03 109 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 A0A0A6YYD4 124 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 C17orf51A8MQB3 221 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 FGFRL1Q8N441 504 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 RPEQ96AT9 228 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 SF3B5Q9BWJ5 86 aaKnown RBP10.99□□□□□ -0.65
VAMP4-201ENST00000236192 H0YIG0 161 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 IFI6P09912 130 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 GAGE5Q13069 117 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 GAGE6Q13070 117 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 TNXAQ16473 311 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 IGFLR1Q9H665 355 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 CEACAM3P40198 252 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 KIR2DS2P43631 304 aa10.99□□□□□ -0.65
VAMP4-201ENST00000236192 ZNF83P51522 516 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms