RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 C1QL2Q7Z5L3 287 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
NEK4-201ENST00000233027 SSBP3Q9BWW4 388 aaPredicted RBP11.45□□□□□ -0.58
NEK4-201ENST00000233027 RBBP6Q7Z6E9 1792 aaKnown RBP11.45□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A10PA6NDY2 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A18PA6NE21 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A16PA6NEW6 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A20PA6NIJ5 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A8PA6NJQ4 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A7PA6NKC0 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A22PA8MWA6 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A12PA8MX19 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A5PA8MXJ8 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A23PA8MXZ1 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 KLF4O43474 513 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 HLA-DQA1P01909 254 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A15PP0C7V4 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A13PP0C7W8 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A14PP0C7W9 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A24PP0C7X0 464 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 COX6A1P12074 109 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 ATP1A1-AS1Q5TC04 95 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 ODAMA1E959 279 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 OR10S1Q8NGN2 331 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 CDC42EP3Q9UKI2 254 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 CKAP5Q14008 2032 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 B4E171 279 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 TSPAN7P41732 249 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 KLF14Q8TD94 323 aaPredicted RBP11.44□□□□□ -0.58
NEK4-201ENST00000233027 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
NEK4-201ENST00000233027 HS3ST3B1Q9Y662 390 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 NUDT3O95989 172 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 PEAR1Q5VY43 1037 aaPredicted RBP11.44□□□□□ -0.58
NEK4-201ENST00000233027 PKIBQ9C010 78 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 UQCR10Q9UDW1 63 aa11.44□□□□□ -0.58
NEK4-201ENST00000233027 GPR6P46095 362 aaPredicted RBP11.43□□□□□ -0.58
NEK4-201ENST00000233027 TMEM54Q969K7 222 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 PARD6GQ9BYG4 376 aaPredicted RBP11.43□□□□□ -0.58
NEK4-201ENST00000233027 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 RALYQ9UKM9 306 aaKnown RBP11.43□□□□□ -0.58
NEK4-201ENST00000233027 PIKFYVEQ9Y2I7 2098 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 F5P12259 2224 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 IGKV1D-43A0A0B4J1Z2 117 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 A0A0B4J293 547 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 RAMP1O60894 148 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 CD8AP01732 235 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 TIAF1O95411 115 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 FABP2P12104 132 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 PLP1P60201 277 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 SPSB4Q96A44 273 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 SMIM8Q96KF7 97 aa11.43□□□□□ -0.58
NEK4-201ENST00000233027 EPOPA6NHQ4 379 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 C8orf88P0DMB2 117 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 EFNB1P98172 346 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 LAMTOR1Q6IAA8 161 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 STPG3Q8N7X2 389 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 A0A0G2JK05 382 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 CBLN1P23435 193 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
NEK4-201ENST00000233027 METTL26Q96S19 204 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 C7orf71A4D174 169 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 FGF5P12034 268 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 MC5RP33032 325 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 CALHM1Q8IU99 346 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 HIST1H4GQ99525 98 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 K7ERU9 68 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 RRHO14718 337 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 WNT9BO14905 357 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 RPL39P5Q59GN2 51 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 MMD2Q8IY49 270 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 PRDM14Q9GZV8 571 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 DMRT1Q9Y5R6 373 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 PRR33A8MZF0 331 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
NEK4-201ENST00000233027 MOSP00540 346 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 ZNF658BQ4V348 819 aaPredicted RBP11.41□□□□□ -0.58
NEK4-201ENST00000233027 TCF19Q9Y242 345 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 THSD7AQ9UPZ6 1657 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 FOLR2P14207 255 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 ANOS1P23352 680 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 PCOLCEQ15113 449 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 SELENOTP62341 195 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
NEK4-201ENST00000233027 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms