RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 IGHV1-46P01743 117 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 RNF2Q99496 336 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 NDFIP1Q9BT67 221 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 CABLES2Q9BTV7 478 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 SCO1O75880 301 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 CD8AP01732 235 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 NAT1P18440 290 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 CD1BP29016 333 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 LYZP61626 148 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 TNFRSF9Q07011 255 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 OR4C13Q8NGP0 309 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 KIAA2026Q5HYC2 2103 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 RBFOX3A6NFN3 312 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 DVL1O14640 695 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 RNF144BQ7Z419 303 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 PNKDQ8N490 385 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 FOXH1O75593 365 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 HKR1P10072 659 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 WT1P19544 449 aaPredicted RBP13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 RUNX1Q01196 453 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 WDR31Q8NA23 367 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 NPVFQ9HCQ7 196 aa13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 TECRQ9NZ01 308 aaKnown RBP13.3□□□□□ -0.28
TMEM30A-201ENST00000230461 SRRM5B3KS81 715 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF90Q03938 601 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 LYRM2Q9NU23 88 aaPredicted RBP13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 A1L4Q6 167 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF735P0CB33 412 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 NHLRC3Q5JS37 347 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF497Q6ZNH5 498 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 CCL19Q99731 98 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 AAMDCQ9H7C9 122 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 METTL1Q9UBP6 276 aaKnown RBP13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 IGKV3-15P01624 115 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 SERF2P84101 59 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 PARP11Q9NR21 331 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 TUBD1Q9UJT1 453 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.282e-14■■■■■ 29.1
TMEM30A-201ENST00000230461 IGKV1D-8A0A087WSZ0 117 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 KBTBD11O94819 623 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF106Q9H2Y7 1883 aaKnown RBP13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 UBE2L3P68036 154 aaKnown RBP13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 CBLN4Q9NTU7 201 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 COLCA1Q6ZS62 124 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 PCDH15Q96QU1 1955 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 LINC00862A6NCI5 91 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 CA7P43166 264 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 ZNF146Q15072 292 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 FAM169BQ8N8A8 192 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 SPRY4Q9C004 299 aa13.28□□□□□ -0.28
TMEM30A-201ENST00000230461 LILRA1O75019 489 aa13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 C2orf68Q2NKX9 166 aa13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 PRR30Q53SZ7 412 aaPredicted RBP13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 F8VVB4 439 aa13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 F8VWA3 439 aa13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 PATZ1Q9HBE1 687 aaKnown RBP13.27□□□□□ -0.28
TMEM30A-201ENST00000230461 CTXND1A0A1B0GTU2 59 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 TFF1P04155 84 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 MPZP25189 248 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 NTF4P34130 210 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 HABP2Q14520 560 aaPredicted RBP13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 VKORC1L1Q8N0U8 176 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 OR4P4Q8NGL7 312 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 OR4X1Q8NH49 305 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 TMEM241Q24JQ0 296 aa13.27□□□□□ -0.29
TMEM30A-201ENST00000230461 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 CFDP00746 253 aaPredicted RBP13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 NMBP08949 121 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 ARL3P36405 182 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 CDKN1AP38936 164 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 SULT1A2P50226 295 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 MED13Q9UHV7 2174 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 MPDU1O75352 247 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 TOX4O94842 621 aa13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
TMEM30A-201ENST00000230461 SLC35E3Q7Z769 313 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms