RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF90Q03938 601 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 FAM19A2Q8N3H0 131 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 TECTBQ96PL2 329 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 ZNF552Q9H707 407 aaPredicted RBP11.86□□□□□ -0.51
SF1-201ENST00000227503 LAMTOR2Q9Y2Q5 125 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 TBL2Q9Y4P3 447 aaKnown RBP11.86□□□□□ -0.51
SF1-201ENST00000227503 ZDBF2Q9HCK1 2354 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 KITLGP21583 273 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 RIPPLY2Q5TAB7 128 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 OR10D3Q8NH80 312 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 KNTC1P50748 2209 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
SF1-201ENST00000227503 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 FCN1O00602 326 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SERPINA7P05543 415 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
SF1-201ENST00000227503 Q0VFX4 171 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
SF1-201ENST00000227503 PRR31Q5SQ13 230 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 LCN12Q6JVE5 192 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 VHLLQ6RSH7 139 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 LRFN3Q9BTN0 628 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 IGHV3-64DA0A0J9YX35 117 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 F6UZH7 168 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SYNGR1O43759 233 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 P04436 131 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 FOLR3P41439 243 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SPSB4Q96A44 273 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 SCO2A0A1W2PP80 73 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 KRASP01116 189 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 IGLV2-14P01704 120 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 AMTP48728 403 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 PCBD1P61457 104 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 WIPI1Q5MNZ9 446 aaPredicted RBP11.85□□□□□ -0.51
SF1-201ENST00000227503 C9orf135Q5VTT2 229 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 ZNF324BQ6AW86 544 aaPredicted RBP11.85□□□□□ -0.51
SF1-201ENST00000227503 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 GNB4Q9HAV0 340 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 MTCH1Q9NZJ7 389 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 OR2W1Q9Y3N9 320 aa11.85□□□□□ -0.51
SF1-201ENST00000227503 TNRC6BQ9UPQ9 1833 aaKnown RBP11.84□□□□□ -0.51
SF1-201ENST00000227503 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 EDDM3BP56851 147 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 BPIFB3P59826 476 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 RANP62826 216 aaKnown RBP11.84□□□□□ -0.51
SF1-201ENST00000227503 Q8NFD4 153 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 OCC1Q8TAD7 63 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 GAL3ST2Q9H3Q3 398 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 RAMP3O60896 148 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 VENTXO95231 258 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 CFIP05156 583 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 CTRLP40313 264 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 PAFAH1B2P68402 229 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 PSG7Q13046 419 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 ABHD3Q8WU67 409 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 DEPPQ9NTK1 212 aa11.84□□□□□ -0.51
SF1-201ENST00000227503 ZG16O60844 167 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 G6PCP35575 357 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 LINC00205P59089 165 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
SF1-201ENST00000227503 PRDX4Q13162 271 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 OR56B2PQ8NGI1 322 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 NRN1Q9NPD7 142 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 NXPH2O95156 264 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 NTF3P20783 257 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
SF1-201ENST00000227503 FOXL1Q12952 345 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 COLCA1Q6ZS62 124 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 MRPL52Q86TS9 123 aaKnown RBP11.83□□□□□ -0.52
SF1-201ENST00000227503 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 APOBEC3DQ96AK3 386 aaPredicted RBP11.83□□□□□ -0.52
SF1-201ENST00000227503 UHRF2Q96PU4 802 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 PRDM14Q9GZV8 571 aa11.83□□□□□ -0.52
SF1-201ENST00000227503 CLDN14O95500 239 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 Q6ZS49 121 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 PINLYPA6NC86 204 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 COX5AP20674 150 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 CDKN1BP46527 198 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 TCL1AP56279 114 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 KLF3P57682 345 aaPredicted RBP11.82□□□□□ -0.52
SF1-201ENST00000227503 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
SF1-201ENST00000227503 UBE2V1Q13404 147 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 OR10G8Q8NGN5 311 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
SF1-201ENST00000227503 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 PATE3B3GLJ2 98 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms