RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FLYWCH2Q96CP2 140 aaKnown RBP18.8■□□□□ 0.6
HOMER3-201ENST00000221222 ZNF486Q96H40 463 aaPredicted RBP18.8■□□□□ 0.6
HOMER3-201ENST00000221222 MCUBQ9NWR8 336 aa18.8■□□□□ 0.6
HOMER3-201ENST00000221222 SCP2D1Q9UJQ7 156 aa18.8■□□□□ 0.6
HOMER3-201ENST00000221222 TENM1Q9UKZ4 2725 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 TMEM89A2RUT3 159 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 PGLYRP1O75594 196 aaPredicted RBP18.79■□□□□ 0.6
HOMER3-201ENST00000221222 RAG2P55895 527 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 BLCAPP62952 87 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 CATR1Q13166 79 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 CBX3Q13185 183 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 SURF2Q15527 256 aaPredicted RBP18.79■□□□□ 0.6
HOMER3-201ENST00000221222 MMDQ15546 238 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 TMEM177Q53S58 311 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 IDO2Q6ZQW0 420 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 Q8N2B8 174 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 FAM71E2Q8N5Q1 922 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 Q8N9W7 124 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 C16orf95Q9H693 158 aa18.79■□□□□ 0.6
HOMER3-201ENST00000221222 NCBP2LA6PVI3 153 aaKnown RBP18.78■□□□□ 0.6
HOMER3-201ENST00000221222 NBR2O15453 112 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 FCGR3BO75015 233 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 NDUFA3O95167 84 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 PGAM2P15259 253 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 CNTFRP26992 372 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 BRWD1-AS2P59051 145 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 OR4F5Q8NH21 305 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 ZFAND1Q8TCF1 268 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 MARCH1Q8TCQ1 289 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 PRSS22Q9GZN4 317 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 ZNF702PQ9H963 129 aa18.78■□□□□ 0.6
HOMER3-201ENST00000221222 S100GP29377 79 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 KIR2DS2P43631 304 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 LGALS7P47929 136 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 RND3P61587 244 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 PHLDA2Q53GA4 152 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 TSNAXQ99598 290 aaKnown RBP18.77■□□□□ 0.6
HOMER3-201ENST00000221222 SLC2A9Q9NRM0 540 aa18.77■□□□□ 0.6
HOMER3-201ENST00000221222 LIN7CQ9NUP9 197 aaKnown RBP18.77■□□□□ 0.6
HOMER3-201ENST00000221222 RBFOX2O43251 390 aaKnown RBP eCLIP18.76■□□□□ 0.59
HOMER3-201ENST00000221222 SPDEFO95238 335 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 CRYZL1O95825 349 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 RLN1P04808 185 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 CTSDP07339 412 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-201ENST00000221222 RPS16P62249 146 aaKnown RBP18.76■□□□□ 0.59
HOMER3-201ENST00000221222 FOXL1Q12952 345 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 ABCA11PQ4W5N1 156 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 OR2B11Q5JQS5 317 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 OR51H1Q8NH63 302 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 OR4S2Q8NH73 311 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 OSR1Q8TAX0 266 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-201ENST00000221222 C7orf50Q9BRJ6 194 aaKnown RBP18.76■□□□□ 0.59
HOMER3-201ENST00000221222 KIAA1456Q9P272 454 aa18.76■□□□□ 0.59
HOMER3-201ENST00000221222 NAP1L6A6NFF2 107 aa18.75■□□□□ 0.59
HOMER3-201ENST00000221222 SPAG16Q8N0X2 631 aa18.75■□□□□ 0.59
HOMER3-201ENST00000221222 HARBI1Q96MB7 349 aa18.75■□□□□ 0.59
HOMER3-201ENST00000221222 GPR132Q9UNW8 380 aa18.75■□□□□ 0.59
HOMER3-201ENST00000221222 MMP24Q9Y5R2 645 aa18.75■□□□□ 0.59
HOMER3-201ENST00000221222 A0A1B0GUS0 222 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 RRHO14718 337 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 IGLV2-23P01705 113 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 PI3P19957 117 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 F2RP25116 425 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 PSG5Q15238 335 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 C5orf64Q2M2E5 130 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 Q6ZS46 218 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 TBC1D26Q86UD7 250 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 TCTEX1D1Q8N7M0 179 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 LINC01006Q8NI28 216 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 CD300LFQ8TDQ1 290 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 RASL11BQ9BPW5 248 aa18.74■□□□□ 0.59
HOMER3-201ENST00000221222 SHOXO15266 292 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 PEX14O75381 377 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 COMPP49747 757 aaPredicted RBP18.73■□□□□ 0.59
HOMER3-201ENST00000221222 PIGPP57054 158 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 POC5Q8NA72 575 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 OR2T6Q8NHC8 308 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 SCGB3A2Q96PL1 93 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 RTBDNQ9BSG5 229 aaPredicted RBP18.73■□□□□ 0.59
HOMER3-201ENST00000221222 BEX1Q9HBH7 125 aa18.73■□□□□ 0.59
HOMER3-201ENST00000221222 CLPSL1A2RUU4 121 aa18.72■□□□□ 0.59
HOMER3-201ENST00000221222 SH2D7A6NKC9 451 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 SRRM4A7MD48 611 aaKnown RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 CENPXA8MT69 81 aa18.72■□□□□ 0.59
HOMER3-201ENST00000221222 MPPED1O15442 326 aa18.72■□□□□ 0.59
HOMER3-201ENST00000221222 RAMP3O60896 148 aa18.72■□□□□ 0.59
HOMER3-201ENST00000221222 MDKP21741 143 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 SLC25A21Q9BQT8 299 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 C5orf66Q9H5L9 145 aa18.72■□□□□ 0.59
HOMER3-201ENST00000221222 FAM212BQ9NTI7 297 aaPredicted RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 C14orf166Q9Y224 244 aaKnown RBP18.72■□□□□ 0.59
HOMER3-201ENST00000221222 LINC00854A0A1B0GVQ3 168 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 PLA2G10O15496 165 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 HLA-DRB1P01911 266 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 VSIG10L2P0DP72 767 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 CCDC71LQ8N9Z2 235 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 FBXL15Q9H469 300 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 COPZ2Q9P299 210 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 VSIG4Q9Y279 399 aa18.71■□□□□ 0.59
HOMER3-201ENST00000221222 SLC25A17O43808 307 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms