RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OR13A1Q8NGR1 328 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 OR2T10Q8NGZ9 312 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 PSG11Q9UQ72 335 aa11.1□□□□□ -0.63
SRP54-201ENST00000216774 MPDU1O75352 247 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 PDLIM4P50479 330 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
SRP54-201ENST00000216774 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 GCNT2Q8N0V5 402 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 Q8N7P7 452 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 GUCD1Q96NT3 240 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 PCGF1Q9BSM1 259 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 MED13Q9UHV7 2174 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 C15orf65H3BRN8 121 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 TIMM8AO60220 97 aaPredicted RBP11.09□□□□□ -0.63
SRP54-201ENST00000216774 AMBPP02760 352 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 CD1BP29016 333 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 PLA2G5P39877 138 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 SOX8P57073 446 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 LCN2P80188 198 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 TLE1Q04724 770 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 RTP5Q14D33 572 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 KCNIP4Q6PIL6 250 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 CISD2Q8N5K1 135 aaKnown RBP11.09□□□□□ -0.63
SRP54-201ENST00000216774 R3HDM4Q96D70 268 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 ELOVL1Q9BW60 279 aa11.09□□□□□ -0.63
SRP54-201ENST00000216774 QTRT1Q9BXR0 403 aaKnown RBP11.09□□□□□ -0.63
SRP54-201ENST00000216774 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 TMPRSS2O15393 492 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 IGHG3P01860 377 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 DDTP30046 118 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 TNFSF10P50591 281 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 FOXF2Q12947 444 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 KIAA2026Q5HYC2 2103 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 BTF3L4Q96K17 158 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 OR6C3Q9NZP0 311 aa11.08□□□□□ -0.64
SRP54-201ENST00000216774 FAM186AA6NE01 2351 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 HPRT1P00492 218 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 PAX1P15863 534 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 SPCS3P61009 180 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
SRP54-201ENST00000216774 MZT1Q08AG7 82 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 PDLIM3Q53GG5 364 aaPredicted RBP11.07□□□□□ -0.64
SRP54-201ENST00000216774 SPINK9Q5DT21 86 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 OR52E5Q8NH55 327 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 TRIB1Q96RU8 372 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 KCNIP2Q9NS61 270 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 FRYQ5TBA9 3013 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 IGHV3-43A0A0B4J1X8 118 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 F6UZH7 168 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 IGHV3-43DP0DP04 118 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 NPPCP23582 126 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 DUTP33316 252 aaKnown RBP11.07□□□□□ -0.64
SRP54-201ENST00000216774 GPR12P47775 334 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 ATP1A1-AS1Q5TC04 95 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 C1orf174Q8IYL3 243 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 TPRX1Q8N7U7 411 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 RFESDQ8TAC1 157 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 IMMP2LQ96T52 175 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
SRP54-201ENST00000216774 DEFB108AA8MXU0 73 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRP54-201ENST00000216774 TFF1P04155 84 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 OR9G9P0C7N8 305 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 GZMBP10144 247 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 OPRK1P41145 380 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 NUBP1P53384 320 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
SRP54-201ENST00000216774 P2RY6Q15077 328 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 ZNF718Q3SXZ3 478 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
SRP54-201ENST00000216774 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 A0A1W2PPV4 95 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 MKRN2OSH3BPM6 223 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 CDX4O14627 284 aaPredicted RBP11.06□□□□□ -0.64
SRP54-201ENST00000216774 AGFG2O95081 481 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 GCH1P30793 250 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 PRDX2P32119 198 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 LINC00205P59089 165 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 HES3Q5TGS1 186 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 DHRS13Q6UX07 377 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 TMPRSS7Q7RTY8 843 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 JPT1Q9UK76 154 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
SRP54-201ENST00000216774 FCGR3BO75015 233 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 GCGP01275 180 aa11.05□□□□□ -0.64
SRP54-201ENST00000216774 CECR9P0C854 216 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms