RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ATRAIDQ6UW56 229 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 SVBPQ8N300 66 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 DTD1Q8TEA8 209 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 PARD6GQ9BYG4 376 aaPredicted RBP24.44■■□□□ 1.5
PABPN1-201ENST00000216727 MMP23AO75900 390 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 PLAUP00749 431 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 BTN1A1Q13410 526 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 ADTRPQ96IZ2 230 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 PRORYQ9H606 182 aa24.44■■□□□ 1.5
PABPN1-201ENST00000216727 ARFGEF3Q5TH69 2177 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 A0A1W2PPE3 182 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 OR8U8P0C7N1 319 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 NQO2P16083 231 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 THBS3P49746 956 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 MRPS11P82912 194 aaKnown RBP24.43■■□□□ 1.5
PABPN1-201ENST00000216727 SLC25A24Q6NUK1 477 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 SLC25A48Q6ZT89 311 aaKnown RBP24.43■■□□□ 1.5
PABPN1-201ENST00000216727 LFNGQ8NES3 379 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 OR4S2Q8NH73 311 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 KAAG1Q9UBP8 84 aa24.43■■□□□ 1.5
PABPN1-201ENST00000216727 ATRXP46100 2492 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 PPIHO43447 177 aaKnown RBP24.42■■□□□ 1.5
PABPN1-201ENST00000216727 RBMXL2O75526 392 aaKnown RBP24.42■■□□□ 1.5
PABPN1-201ENST00000216727 FCN3O75636 299 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 ZNF273Q14593 569 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 PRAMEF5Q5TYX0 476 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 DPPA3Q6W0C5 159 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 LILRB2Q8N423 598 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 SCGB1C1Q8TD33 95 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 FAM157AC9JC47 383 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 SIAH2O43255 324 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 ZG16O60844 167 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 OR9G9P0C7N8 305 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 ERVK-16P61578 105 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 LYG1Q8N1E2 194 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 HIPK2Q9H2X6 1198 aa24.42■■□□□ 1.5
PABPN1-201ENST00000216727 IGHV1-69-2A0A0G2JMI3 117 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 NDUFB3O43676 98 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 LY86O95711 162 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 LRRC75BQ2VPJ9 315 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 LRRC10Q5BKY1 277 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 THNSL2Q86YJ6 484 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 CA5BP1Q8WTZ4 195 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 ZCCHC14Q8WYQ9 949 aaKnown RBP24.41■■□□□ 1.5
PABPN1-201ENST00000216727 OR4C12Q96R67 309 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 SCRT1Q9BWW7 348 aa24.41■■□□□ 1.5
PABPN1-201ENST00000216727 SLC38A11Q08AI6 406 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 CDSNQ15517 529 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 AKR1C8PQ5T2L2 129 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 UNQ6494/PRO21346Q6UXR6 183 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 HEPN1Q6WQI6 88 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 SMG1Q96Q15 3661 aaKnown RBP24.4■■□□□ 1.5
PABPN1-201ENST00000216727 PSMG3Q9BT73 122 aaPredicted RBP24.4■■□□□ 1.5
PABPN1-201ENST00000216727 ANKHD1Q8IWZ3 2542 aaKnown RBP24.4■■□□□ 1.5
PABPN1-201ENST00000216727 NDUFA2O43678 99 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 ZDHHC16Q969W1 377 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 ZNF714Q96N38 554 aa24.4■■□□□ 1.5
PABPN1-201ENST00000216727 QTRT1Q9BXR0 403 aaKnown RBP24.4■■□□□ 1.5
PABPN1-201ENST00000216727 NKX6-2Q9C056 277 aaPredicted RBP24.4■■□□□ 1.5
PABPN1-201ENST00000216727 DAOP14920 347 aa24.39■■□□□ 1.5
PABPN1-201ENST00000216727 TMEM200BQ69YZ2 307 aa24.39■■□□□ 1.5
PABPN1-201ENST00000216727 MUC15Q8N387 334 aa24.39■■□□□ 1.5
PABPN1-201ENST00000216727 OR52E5Q8NH55 327 aa24.39■■□□□ 1.5
PABPN1-201ENST00000216727 SFTA3P0C7M3 94 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 GNG10P50151 68 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 GUCA2BQ16661 112 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 GUK1Q16774 197 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 ATP6V1FQ16864 119 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 ZNF672Q499Z4 452 aaPredicted RBP24.39■■□□□ 1.49
PABPN1-201ENST00000216727 PDLIM3Q53GG5 364 aaPredicted RBP24.39■■□□□ 1.49
PABPN1-201ENST00000216727 LYPD2Q6UXB3 125 aa24.39■■□□□ 1.49
PABPN1-201ENST00000216727 SREK1IP1Q8N9Q2 155 aaPredicted RBP24.39■■□□□ 1.49
PABPN1-201ENST00000216727 KALRNO60229 2985 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 NCOR2Q9Y618 2525 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 A0A1B0GW64 132 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 MED19A0JLT2 244 aaPredicted RBP24.38■■□□□ 1.49
PABPN1-201ENST00000216727 BTBD17A6NE02 478 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 PMS2P5A8MQ11 134 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 CEBPZOSA8MTT3 80 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 PEA15Q15121 130 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 ZNF383Q8NA42 475 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 OR4A16Q8NH70 328 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 WDR61Q9GZS3 305 aaKnown RBP24.38■■□□□ 1.49
PABPN1-201ENST00000216727 CHD8Q9HCK8 2581 aa24.38■■□□□ 1.49
PABPN1-201ENST00000216727 C9JQL5 133 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 PUSL1Q8N0Z8 303 aaKnown RBP24.37■■□□□ 1.49
PABPN1-201ENST00000216727 TMEM204Q9BSN7 226 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 CTSZQ9UBR2 303 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 FBXO7Q9Y3I1 522 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 HCFC1P51610 2035 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 SPCS3P61009 180 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 HFEQ30201 348 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 SP5Q6BEB4 398 aaPredicted RBP24.37■■□□□ 1.49
PABPN1-201ENST00000216727 OR8G2PQ6IF36 304 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 SSX9Q7RTT3 188 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 PBDC1Q9BVG4 233 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 TMEM140Q9NV12 185 aa24.37■■□□□ 1.49
PABPN1-201ENST00000216727 H2AFB1P0C5Y9 115 aa24.36■■□□□ 1.49
PABPN1-201ENST00000216727 LOXP28300 417 aaPredicted RBP24.36■■□□□ 1.49
PABPN1-201ENST00000216727 RELBQ01201 579 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms