RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SDK2Q58EX2 2172 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 ZNF207O43670 478 aaKnown RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 ISG15P05161 165 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 KIR2DL2P43627 348 aaPredicted RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 PSG5Q15238 335 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 ZNF79Q15937 498 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 OR10J6PQ8NGY7 276 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 NOL4LQ96MY1 436 aaPredicted RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 TECRQ9NZ01 308 aaKnown RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 ZNF250P15622 560 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 PTGDSP41222 190 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 CD81P60033 236 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 ABLIM2Q6H8Q1 611 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 PLSCR4Q9NRQ2 329 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
SIX4-201ENST00000216513 MFAP4P55083 255 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
SIX4-201ENST00000216513 FCGR3AP08637 254 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 SLC25A16P16260 332 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 CSRP3P50461 194 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 IFITM3Q01628 133 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 ZDHHC22Q8N966 263 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 CHAC2Q8WUX2 184 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 FBXL15Q9H469 300 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 IGHV3-66A0A0C4DH42 116 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 CBY3A6NI87 242 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 GNG4P50150 75 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 A0A1B0GU03 582 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 SYNGR2O43760 224 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 CCL3L1P16619 93 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 KLF9Q13886 244 aaPredicted RBP11.65□□□□□ -0.54
SIX4-201ENST00000216513 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 J3QW42 95 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 C8orf82Q6P1X6 216 aaPredicted RBP11.65□□□□□ -0.54
SIX4-201ENST00000216513 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 GPX7Q96SL4 187 aaPredicted RBP11.65□□□□□ -0.54
SIX4-201ENST00000216513 PLA2G10O15496 165 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 FGF9P31371 208 aaPredicted RBP11.65□□□□□ -0.54
SIX4-201ENST00000216513 PMS2P11Q13670 270 aa11.65□□□□□ -0.54
SIX4-201ENST00000216513 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
SIX4-201ENST00000216513 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 TRAV20A0A0B4J274 112 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 OR5AL1P0C617 328 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 LY6G6EA0A0G2JKS1 128 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 IGHMP01871 453 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 CTSDP07339 412 aaPredicted RBP11.64□□□□□ -0.55
SIX4-201ENST00000216513 AQP3Q92482 292 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 U3KQA8 63 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
SIX4-201ENST00000216513 IGHV3OR16-8A0A075B7F1 116 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 CEACAM18A8MTB9 384 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 SLC2A9Q9NRM0 540 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 A0A087WV48 116 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 FCN1O00602 326 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
SIX4-201ENST00000216513 RPRMLQ8N4K4 120 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 PRSS3P2Q8NHM4 247 aa11.64□□□□□ -0.55
SIX4-201ENST00000216513 PEAR1Q5VY43 1037 aaPredicted RBP11.63□□□□□ -0.55
SIX4-201ENST00000216513 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
SIX4-201ENST00000216513 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 RHOVQ96L33 236 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 KLF4O43474 513 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 FCGR2BP31994 310 aaPredicted RBP11.63□□□□□ -0.55
SIX4-201ENST00000216513 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 IGHV1-46P01743 117 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 UBE2V2Q15819 145 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 LGALSLQ3ZCW2 172 aaPredicted RBP11.63□□□□□ -0.55
SIX4-201ENST00000216513 GTSCR1Q86UQ5 136 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 ASB13Q8WXK3 278 aa11.63□□□□□ -0.55
SIX4-201ENST00000216513 A0A0G2JLM5 398 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 PAGE4O60829 102 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
SIX4-201ENST00000216513 IL17RELQ6ZVW7 336 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 RTN4RL2Q86UN3 420 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 OR5AC2Q9NZP5 309 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 FOXG1P55316 489 aaPredicted RBP11.62□□□□□ -0.55
SIX4-201ENST00000216513 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
SIX4-201ENST00000216513 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 DRAM1Q8N682 238 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
SIX4-201ENST00000216513 TGOLN2O43493 480 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 OR2A4O95047 310 aa11.62□□□□□ -0.55
SIX4-201ENST00000216513 TMEM50BP56557 158 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms