RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 HIST1H4AP62805 103 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 SRSF5Q13243 272 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-201ENST00000216484 PCMT1P22061 227 aa12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 QTRT1Q9BXR0 403 aaKnown RBP12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 ADRA2AP08913 450 aa12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 SSBP4Q9BWG4 385 aaPredicted RBP12.71□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF250P15622 560 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 CENPVQ7Z7K6 275 aaPredicted RBP12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 RUNX1Q01196 453 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 FREM1Q5H8C1 2179 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 M0R381 172 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 MAGEA5P43359 124 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 MEGF9Q9H1U4 602 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 HTN3P15516 51 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 HOXA5P20719 270 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 OR51M1Q9H341 326 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 CACNA1GO43497 2377 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 GAPDHP04406 335 aaKnown RBP12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 ATP5G2Q06055 141 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 SCGB3A1Q96QR1 104 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
SPTLC2-201ENST00000216484 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 FOXI3A8MTJ6 420 aaPredicted RBP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 CCL21O00585 134 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 HPRT1P00492 218 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 RPL27AP46776 148 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 RPS11P62280 158 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 NKG7Q16617 165 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 XAF1Q6GPH4 301 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 PTPRFP10586 1907 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 VSIG10L2P0DP72 767 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 MZB1Q8WU39 189 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 WDR34Q96EX3 536 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 GGACTQ9BVM4 153 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 DNAJC4Q9NNZ3 241 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 MED12LQ86YW9 2145 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 TNFRSF12AQ9NP84 129 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 RPL8P62917 257 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 LY6EQ16553 131 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 VGLL1Q99990 258 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 SLC25A15Q9Y619 301 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 OR4D11Q8NGI4 311 aa12.69□□□□□ -0.38
SPTLC2-201ENST00000216484 NPIPB8E9PQR5 432 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 NPIPB9F8W1W9 429 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 NPIPB7O75200 414 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 SDHCQ99643 169 aaPredicted RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 CEACAM5P06731 702 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 FNDC4Q9H6D8 234 aaPredicted RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 H7C1H1 209 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 UNQ5815/PRO19632Q6UWF5 114 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 PRSS41Q7RTY9 318 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 LINC00615Q96LM1 132 aaPredicted RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 SLC6A13Q9NSD5 602 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 MRM2Q9UI43 246 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 LURAP1LQ8IV03 231 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 APOBEC4Q8WW27 367 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 DUX3Q96PT4 197 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 EIF3GO75821 320 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 LINC00614P0C842 121 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 TDGF1P3P51864 188 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 SF3B6Q9Y3B4 125 aaKnown RBP12.68□□□□□ -0.38
SPTLC2-201ENST00000216484 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 DLL1O00548 723 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 PNLIPP16233 465 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 SELENOTP62341 195 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 ALX4Q9H161 411 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 LSM6P62312 80 aaKnown RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 DENND4AQ7Z401 1863 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 COL16A1Q07092 1604 aaPredicted RBP12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 CCL8P80075 99 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF345Q14585 488 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 CITED1Q99966 193 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 CRPP02741 224 aa12.67□□□□□ -0.38
SPTLC2-201ENST00000216484 RREB1Q92766 1687 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 RPL36A-HNRNPH2H7BZ11 118 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 SYNGR3O43761 229 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms