RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 A0A1W2PRM7 423 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 H0YJW9 148 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 TXNL1O43396 289 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 C1QBP02746 253 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 RRASP10301 218 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 CEACAM3P40198 252 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 IL15RAQ13261 267 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 RTL8BQ17RB0 113 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 Q5BKY6 102 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 TPTE2P1Q5T6R2 138 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 GPR146Q96CH1 333 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 RRNAD1Q96FB5 475 aaKnown RBP12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 RANBP3Q9H6Z4 567 aaPredicted RBP12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
SNRPD3-201ENST00000215829 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 G3V3Q6 166 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 CRYZL1O95825 349 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 KRASP01116 189 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 APOA2P02652 100 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 EPHA1P21709 976 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 G6PCP35575 357 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 AKR1C2P52895 323 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 LGALS4P56470 323 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 TMEM249Q2WGJ8 235 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 MINOS1Q5TGZ0 78 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 ZBTB8BQ8NAP8 495 aaPredicted RBP12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 PPP1R1CQ8WVI7 109 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 C7orf69Q9H7B7 122 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 MMP24Q9Y5R2 645 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 MINOS1-NBL1R4GNA1 71 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 CR1P17927 2039 aa12.9□□□□□ -0.34
SNRPD3-201ENST00000215829 IGHV1-3A0A0C4DH29 117 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 A0A0G2JRQ6 117 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 IGHV4-31P0DP07 118 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 SLC25A6P12236 298 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 MC5RP33032 325 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 FGL1Q08830 312 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 R3HDM4Q96D70 268 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 A0A1B0GU03 582 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 TGFAP01135 160 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 IGKV1-16P04430 117 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 P0C879 139 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 NQO2P16083 231 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 GZMKP49863 264 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 THOC7Q6I9Y2 204 aaKnown RBP12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 NOXA1Q86UR1 476 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 PDPNQ86YL7 162 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 HILPDAQ9Y5L2 63 aa12.89□□□□□ -0.35
SNRPD3-201ENST00000215829 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 H7C2Y5 167 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 PSMB6P28072 239 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 RAB13P51153 203 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 MIDNQ504T8 468 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 Q6ZRM9 215 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 MOB3BQ86TA1 216 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 OR4D5Q8NGN0 318 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 WASHC3Q9Y3C0 194 aa12.88□□□□□ -0.35
SNRPD3-201ENST00000215829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.356e-7■■■□□ 18.2
SNRPD3-201ENST00000215829 TRAV14DV4A0A0A6YYC5 116 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 J3QLI3 93 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 HRASP01112 189 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 EIF2B2P49770 351 aaKnown RBP12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 ERVK-16P61578 105 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 TMEM177Q53S58 311 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 OR8H3Q8N146 312 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
SNRPD3-201ENST00000215829 NPFFO15130 113 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 PITX3O75364 302 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 MPC2O95563 127 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 SSX2Q16385 188 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 MALSU1Q96EH3 234 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
SNRPD3-201ENST00000215829 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms