RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 H2BFSP57053 126 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 PSG9Q00887 426 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 ABHD12Q8N2K0 398 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 APCDD1LQ8NCL9 501 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 OR4B1Q8NGF8 309 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 DDB2Q92466 427 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 CA2P00918 260 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 TGIF1Q15583 401 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 FAM106AQ4KMX7 169 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 ZCCHC14Q8WYQ9 949 aaKnown RBP11.61□□□□□ -0.55
SF3A1-201ENST00000215793 DLEC1Q9Y238 1755 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 ZG16O60844 167 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 S1PR2O95136 353 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 COX6CP09669 75 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 BTF3P20290 206 aaKnown RBP11.61□□□□□ -0.55
SF3A1-201ENST00000215793 FCGR2BP31994 310 aaPredicted RBP11.61□□□□□ -0.55
SF3A1-201ENST00000215793 NUBP1P53384 320 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 RND3P61587 244 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
SF3A1-201ENST00000215793 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-201ENST00000215793 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-201ENST00000215793 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 KLK2P20151 261 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 CA7P43166 264 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 LAMTOR1Q6IAA8 161 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 TMEM54Q969K7 222 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 DANCRP0C864 163 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 AGAP20933 346 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 TFPI2P48307 235 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 EGR4Q05215 589 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 TMEM187Q14656 261 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-201ENST00000215793 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 OR51M1Q9H341 326 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 IL17BQ9UHF5 180 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 H0YL77 283 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 SIAH2O43255 324 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 MRPL32Q9BYC8 188 aaKnown RBP11.6□□□□□ -0.55
SF3A1-201ENST00000215793 GLIPR1P48060 266 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 C12orf54Q6X4T0 127 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 Q6ZT83 130 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 OR1P1Q8NH06 330 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 GALNT14Q96FL9 552 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 CLEC7AQ9BXN2 247 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 TLNRD1Q9H1K6 362 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 SPTBP11277 2137 aa11.6□□□□□ -0.55
SF3A1-201ENST00000215793 H3BVH4 76 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 KLF4O43474 513 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 LIPFP07098 398 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ZNF146Q15072 292 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ZNF818PQ6ZRF7 136 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 PSMG3Q9BT73 122 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-201ENST00000215793 C17orf51A8MQB3 221 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 CTSBP07858 339 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 NPBWR2P48146 333 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 RTTNQ86VV8 2226 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 RRN3P1Q2M238 152 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 TCF24Q7RTU0 167 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ALPK2Q86TB3 2170 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 DRAM1Q8N682 238 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 PHLDA3Q9Y5J5 127 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 FOCADQ5VW36 1801 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ZNHIT1O43257 154 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 SP9P0CG40 484 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 ARL14EPLP0DKL9 152 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-201ENST00000215793 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
SF3A1-201ENST00000215793 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
SF3A1-201ENST00000215793 TRIOBPQ9H2D6 2365 aa11.58□□□□□ -0.55
SF3A1-201ENST00000215793 ARF6P62330 175 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 RNFT1Q5M7Z0 435 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 ERASQ7Z444 233 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 PPP1R32Q7Z5V6 425 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 EAF1Q96JC9 268 aaPredicted RBP11.58□□□□□ -0.56
SF3A1-201ENST00000215793 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
SF3A1-201ENST00000215793 AMY1AP04745 511 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 TIMP4Q99727 224 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 B9A039 149 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 GLRXP35754 106 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 GFRA1P56159 465 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 LAIR2Q6ISS4 152 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 MUC15Q8N387 334 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 RALYQ9UKM9 306 aaKnown RBP11.58□□□□□ -0.56
SF3A1-201ENST00000215793 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.56
SF3A1-201ENST00000215793 RECKO95980 971 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms