RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR10W1Q8NGF6 305 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 OR2K2Q8NGT1 345 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 PGPA6NDG6 321 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 J3KRW8 73 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 CD5P06127 495 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 ZNF664Q8N3J9 261 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 OR4D5Q8NGN0 318 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 RND1Q92730 232 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 SYNGR1O43759 233 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 HBBP68871 147 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
VCL-201ENST00000211998 NEUROG1Q92886 237 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 RASL11BQ9BPW5 248 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 OR51B2Q9Y5P1 312 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 DICER1Q9UPY3 1922 aaKnown RBP8.99□□□□□ -0.97
VCL-201ENST00000211998 HRKO00198 91 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 RBFOX2O43251 390 aaKnown RBP eCLIP8.98□□□□□ -0.97
VCL-201ENST00000211998 MNX1P50219 401 aaPredicted RBP8.98□□□□□ -0.97
VCL-201ENST00000211998 DCAF10Q5QP82 559 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 SPINK14Q6IE38 97 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 ASCL5Q7RTU5 278 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 GTSF1LQ9H1H1 148 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 TTC3P53804 2025 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 PRSS2P07478 247 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 ROM1Q03395 351 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 FGFRL1Q8N441 504 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 WNT5BQ9H1J7 359 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 MEF2CQ06413 473 aaPredicted RBP8.98□□□□□ -0.97
VCL-201ENST00000211998 SRSF5Q13243 272 aaKnown RBP8.98□□□□□ -0.97
VCL-201ENST00000211998 PRSS53Q2L4Q9 553 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 TMEM160Q9NX00 188 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 SEMA5BQ9P283 1151 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 CDX4O14627 284 aaPredicted RBP8.98□□□□□ -0.97
VCL-201ENST00000211998 CDIPTO14735 213 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 UNC119Q13432 240 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 NR2C2APQ86WQ0 139 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 SMRP1Q8NCR6 262 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 NCOR1P1Q9H4R4 102 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 TRAV8-2A0A0B4J237 113 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 SSTR5P35346 364 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 SLC25A40Q8TBP6 338 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 PLSCR2Q9NRY7 297 aa8.98□□□□□ -0.97
VCL-201ENST00000211998 A0A1W2PRD5 423 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 A0A1W2PRF3 423 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 A0A1W2PRM7 423 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 TGFAP01135 160 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 ZNF735P0CB33 412 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 COX7A1P24310 79 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 GAB4Q2WGN9 574 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 LINC00596Q86U02 117 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 SP7Q8TDD2 431 aaPredicted RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 SRSF12Q8WXF0 261 aaKnown RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 PLAUP00749 431 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 UCNP55089 124 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 RPL31P62899 125 aaKnown RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 C1RLQ9NZP8 487 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 HIGD1AQ9Y241 93 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 IGHV5-10-1A0A0J9YXX1 117 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 FAM90A26D6RGX4 464 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 C3orf80F5H4A9 247 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 ZG16O60844 167 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 HYPMO75409 117 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 GCHFRP30047 84 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 GPR6P46095 362 aaPredicted RBP8.97□□□□□ -0.97
VCL-201ENST00000211998 SGK494Q96LW2 274 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 OR11H12B2RN74 326 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 IGHV2-70P01814 119 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 OR11H1Q8NG94 326 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 OR11H2Q8NH07 326 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 LOXL4Q96JB6 756 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 CITED1Q99966 193 aa8.97□□□□□ -0.97
VCL-201ENST00000211998 CA11O75493 328 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 MAGEA5P43359 124 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 HIST1H1AQ02539 215 aaPredicted RBP8.96□□□□□ -0.97
VCL-201ENST00000211998 TUSC5Q8IXB3 177 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 C1orf174Q8IYL3 243 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 LTBP4Q8N2S1 1624 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 IGHV3-21A0A0B4J1V1 117 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 ESDP10768 282 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 GZMHP20718 246 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 TIMM23BQ5SRD1 257 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 INO80CQ6PI98 192 aaPredicted RBP8.96□□□□□ -0.97
VCL-201ENST00000211998 ZNF488Q96MN9 340 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 ZNF71Q9NQZ8 489 aaPredicted RBP8.96□□□□□ -0.97
VCL-201ENST00000211998 RNF7Q9UBF6 113 aa8.96□□□□□ -0.97
VCL-201ENST00000211998 J3QT63 122 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 APOHP02749 345 aaPredicted RBP8.96□□□□□ -0.98
VCL-201ENST00000211998 CCL4P13236 92 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 OR1L8Q8NGR8 309 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 C18orf15Q96N68 181 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 RTBDNQ9BSG5 229 aaPredicted RBP8.96□□□□□ -0.98
VCL-201ENST00000211998 OR2H1Q9GZK4 316 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 SELENOKQ9Y6D0 94 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 PGPEP1LA6NFU8 196 aa8.96□□□□□ -0.98
VCL-201ENST00000211998 APOMO95445 188 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms