RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 PRSS1P07477 247 aa10.44□□□□□ -0.74
TSPAN9-201ENST00000011898 RNPS1Q15287 305 aaKnown RBP10.44□□□□□ -0.74
TSPAN9-201ENST00000011898 Q8IYB0 196 aa10.44□□□□□ -0.74
TSPAN9-201ENST00000011898 SIGMAR1Q99720 223 aa10.44□□□□□ -0.74
TSPAN9-201ENST00000011898 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
TSPAN9-201ENST00000011898 CXorf66Q5JRM2 361 aaPredicted RBP10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 NPIPB13A6NJU9 1138 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 NPIPB4C9JG80 1138 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 DNPH1O43598 174 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CT45A6P0DMU7 189 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CT45A5P0DMU8 189 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CT45A7P0DMV0 189 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 PSG4Q00888 419 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CT45A1Q5HYN5 189 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CT45A3Q8NHU0 189 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 SARAFQ96BY9 339 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 TMEM140Q9NV12 185 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 TRAV39A0A0B4J263 110 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 TRDCB7Z8K6 153 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 H0YIZ8 118 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 TIAF1O95411 115 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 FAM157CP0CG43 387 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 POC1AQ8NBT0 407 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CHRNA10Q9GZZ6 450 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 CLN8Q9UBY8 286 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 ABCA1O95477 2261 aa10.43□□□□□ -0.74
TSPAN9-201ENST00000011898 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 LEPROTL1O95214 131 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 MT-ND6P03923 174 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 ZNF883P0CG24 379 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 BCL3P20749 454 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 OR5A2Q8NGI9 324 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 RNF126Q9BV68 326 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 RNF122Q9H9V4 155 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 DYNLRB1Q9NP97 96 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 MPC1Q9Y5U8 109 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 CORTO00230 105 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 KBTBD11O94819 623 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 IGHMP01871 453 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 ZNF137PP52743 207 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 FAM19A2Q8N3H0 131 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 FGF11Q92914 225 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 P2RX4Q99571 388 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 MYOZ1Q9NP98 299 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 TNFSF13O75888 250 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 SERF1AO75920 110 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 SERF2P84101 59 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 FNDC4Q9H6D8 234 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 PPIAL4DF5H284 164 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 SMIM21Q3B7S5 101 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 C1QL2Q7Z5L3 287 aa10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.42□□□□□ -0.74
TSPAN9-201ENST00000011898 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 PLXND1Q9Y4D7 1925 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 LOC107984156A0A0G2JMH3 177 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 A0A1W2PQM1 296 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 HELTA6NFD8 242 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 RSPO4Q2I0M5 234 aaPredicted RBP10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 ARL17AQ8IVW1 177 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 GBGT1Q8N5D6 347 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 CT55Q8WUE5 264 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 OR8B2Q96RD0 313 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 HS3ST3B1Q9Y662 390 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 ATXN7O15265 892 aaPredicted RBP10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 ZNHIT1O43257 154 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 LYZL6O75951 148 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 MELTFP08582 738 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 RBM11P57052 281 aaKnown RBP10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 C3AR1Q16581 482 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 LYRM7Q5U5X0 104 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 OR10W1Q8NGF6 305 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 OR52M1Q8NGK5 317 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 S1PR3Q99500 378 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 PRDM13Q9H4Q3 707 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 UBTD1Q9HAC8 227 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 DEFB108AA8MXU0 73 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 F8VVB4 439 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 F8VWA3 439 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 H3BUT2 72 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 MAGEA5P43359 124 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 MEOX1P50221 254 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 RHOBP62745 196 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 SSMEM1Q8WWF3 244 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 ABHD14AQ9BUJ0 271 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 WNT5BQ9H1J7 359 aa10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 CISD1Q9NZ45 108 aaKnown RBP10.41□□□□□ -0.74
TSPAN9-201ENST00000011898 A0A1B0GTI1 187 aa10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 CDIPTO14735 213 aa10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 SRSF10O75494 262 aaKnown RBP10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 CA1P00915 261 aaPredicted RBP10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 FNDC7Q5VTL7 733 aa10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 TMEM170AQ8WVE7 144 aa10.4□□□□□ -0.74
TSPAN9-201ENST00000011898 H1FXQ92522 213 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms