RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	MEIOC	A2RUB1	952 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	CCDC182	A6NF36	153 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	RNASEK-C17orf49	H0YIS7	233 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	PRKY	O43930	277 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	NOS1AP	O75052	506 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	SULT1C4	O75897	302 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	IGLV3-1	P01715	115 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	IGHV4-59	P01825	116 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	TTR	P02766	147 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	PSG2	P11465	335 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	OMG	P23515	440 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	DAP	P51397	102 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	CXCR4	P61073	352 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	RPL31	P62899	125 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	DGUOK	Q16854	277 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	KLHL22	Q53GT1	634 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	TMEM236	Q5W0B7	351 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	C12orf73	Q69YU5	71 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523		Q6ZSR3	168 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	UTS2B	Q765I0	119 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	FAM220A	Q7Z4H9	259 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	CALHM1	Q8IU99	346 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	BOD1L2	Q8IYS8	172 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	LINC01561	Q8N1V8	128 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	OR5T2	Q8NGG2	359 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	PPP1R14B	Q96C90	147 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	DUS3L	Q96G46	650 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	OPALIN	Q96PE5	141 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	USE1	Q9NZ43	259 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	CLEC2D	Q9UHP7	191 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	AP4S1	Q9Y587	144 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	ORC6	Q9Y5N6	252 aa		4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	SOX21	Q9Y651	276 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-238	ENST00000641523	IGKV1D-17	A0A075B6S4	117 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523		A0A1B0GW55	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	RFPL4A	A6NLU0	287 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	RFPL4AL1	F8VTS6	287 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CCS	O14618	274 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ANGPTL7	O43827	346 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	XPNPEP2	O43895	674 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CYB5A	P00167	134 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	RBP4	P02753	201 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L2	P0CJ85	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L3	P0CJ86	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L4	P0CJ87	422 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L5	P0CJ88	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L6	P0CJ89	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L7	P0CJ90	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	PGA5	P0DJD9	388 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CCL1	P22362	96 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	HTR1F	P30939	366 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	SAA4	P35542	130 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	HOXA1	P49639	335 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	TMEM50B	P56557	158 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CDC42	P60953	191 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	POLR2G	P62487	172 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ACTC1	P68032	377 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ACTA1	P68133	377 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	TNXA	Q16473	311 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	C5orf47	Q569G3	176 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	SOHLH1	Q5JUK2	328 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	TMEM42	Q69YG0	159 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	KDM4D	Q6B0I6	523 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ACP7	Q6ZNF0	438 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	PLEKHG7	Q6ZR37	379 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	PDZD9	Q8IXQ8	264 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523		Q8IYB0	196 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	C10orf67	Q8IYJ2	551 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ENTHD1	Q8IYW4	607 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523		Q8N7P7	452 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	TCEANC	Q8N8B7	351 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	YIPF7	Q8N8F6	280 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ZNRF1	Q8ND25	227 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR5T1	Q8NG75	326 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR4F17	Q8NGA8	305 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR4C13	Q8NGP0	309 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR2T27	Q8NH04	317 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	TRUB1	Q8WWH5	349 aa	Known RBP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	FCAMR	Q8WWV6	532 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	PP6455	Q8WZ26	134 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	SEH1L	Q96EE3	360 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	MRPL48	Q96GC5	212 aa	Known RBP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CENPN	Q96H22	339 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR4F4	Q96R69	305 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	NRIP2	Q9BQI9	281 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	CDCA4	Q9BXL8	241 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	C16orf95	Q9H693	158 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ADGRL4	Q9HBW9	690 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	DUX4	Q9UBX2	424 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ZNF222	Q9UK12	451 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	ZNF221	Q9UK13	617 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	OR52A1	Q9UKL2	312 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	COPS3	Q9UNS2	423 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523	LRRC42	Q9Y546	428 aa		4.97	□□□□□ -1.61
CASC19-238	ENST00000641523		V9GYS6	101 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms