RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MYOZ1Q9NP98 299 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-220ENST00000640076 DUX4Q9UBX2 424 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 ANAPC10Q9UM13 185 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 CCDC168Q8NDH2 2452 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 FCGR3AP08637 254 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 RCVRNP35243 200 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 GPR12P47775 334 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 PAX5Q02548 391 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 GRK1Q15835 563 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 RSBN1Q5VWQ0 802 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-220ENST00000640076 LYPD2Q6UXB3 125 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF525Q8N782 197 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 DPAGT1Q9H3H5 408 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 RAB18Q9NP72 206 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 IFT46Q9NQC8 304 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 KAAG1Q9UBP8 84 aa6.57□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF230Q9UIE0 474 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-220ENST00000640076 TRAV26-1A0A087WT03 109 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 TRBV6-6A0A0A6YYG2 114 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 ANKRD20A5PA0PJZ0 165 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 TMEM89A2RUT3 159 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 ISPDA4D126 451 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 MGST3O14880 152 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 MT-ND4P03905 459 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 INPP1P49441 399 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 AESQ08117 197 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 KLF9Q13886 244 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF57Q68EA5 555 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 SLC36A1Q7Z2H8 476 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 HOGA1Q86XE5 327 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 TOMM5Q8N4H5 51 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 MRPL30Q8TCC3 161 aaKnown RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 CHPT1Q8WUD6 406 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 MAFIPQ8WZ33 124 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 COQ2Q96H96 371 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 ST6GALNAC5Q9BVH7 336 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 FAM234AQ9H0X4 552 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 RANBP3Q9H6Z4 567 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 TAS2R8Q9NYW2 309 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 CTSZQ9UBR2 303 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF107Q9UII5 783 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-220ENST00000640076 KIF25Q9UIL4 384 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
SCARB2-220ENST00000640076 IGKV1D-8A0A087WSZ0 117 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 TMEM30CPA0ZSE6 113 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 CEACAM18A8MTB9 384 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 PLA2G10O15496 165 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 FCN3O75636 299 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 ADAP1O75689 374 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 GPR6P46095 362 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 GLIPR1P48060 266 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 EDDM3AQ14507 147 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 SLC35E4Q6ICL7 350 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 OR52W1Q6IF63 320 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF880Q6PDB4 577 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 FGFRL1Q8N441 504 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 BEST4Q8NFU0 473 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 OR4K15Q8NH41 348 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 Q9N2K0 584 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 KPTNQ9Y664 436 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 NOTCH2Q04721 2471 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 MEIKINA0A087WXM9 373 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 VWC2LB2RUY7 222 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 ZNF736B4DX44 427 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 J3QR06 171 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 NXPH3O95157 252 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 CD3DP04234 171 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 RCC1P18754 421 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 HLA-DMAP28067 261 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 ERP29P30040 261 aaKnown RBP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 CEACAM3P40198 252 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 PDLIM4P50479 330 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 TAS2R19P59542 299 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 ASAH1Q13510 395 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCARB2-220ENST00000640076 Q6ZS49 121 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 GDPD3Q7L5L3 318 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 SPICQ8N5J4 248 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 TPRX1Q8N7U7 411 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 LINC01356Q8N9X3 169 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 TMEM229BQ8NBD8 167 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 CCDC107Q8WV48 283 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 URGCP-MRPS24S4R325 110 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 VPS13CQ709C8 3753 aa6.55□□□□□ -1.36
SCARB2-220ENST00000640076 CREBBPQ92793 2442 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
SCARB2-220ENST00000640076 TRAV39A0A0B4J263 110 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 ODAMA1E959 279 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 DVL1O14640 695 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 NDUFB3O43676 98 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 CD74P04233 296 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 TBPP20226 339 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 HRH1P35367 487 aa6.54□□□□□ -1.36
SCARB2-220ENST00000640076 ID1P41134 155 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms