RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 FCGR1BQ92637 280 aa12.08□□□□□ -0.48
PTPRVP-204ENST00000639439 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
PTPRVP-204ENST00000639439 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
PTPRVP-204ENST00000639439 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 TRBV6-7A0A0A0MS04 114 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 SOX15O60248 233 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 IGKV1-16P04430 117 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 EGR2P11161 476 aaPredicted RBP12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 GNB3P16520 340 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 TALDO1P37837 337 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 LGALS7P47929 136 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 GNB1P62873 340 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 ACTBL2Q562R1 376 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 SCOCQ9UIL1 159 aa12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
PTPRVP-204ENST00000639439 A0A075B6Q4 140 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 ATP6V1G2O95670 118 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 CA2P00918 260 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 GSTT2P0CG29 244 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 GSTT2BP0CG30 244 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 FGF9P31371 208 aaPredicted RBP12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 ECI1P42126 302 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 CBX3Q13185 183 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 ARFRP1Q13795 201 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 IGSF11Q5DX21 431 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 ASPHD1Q5U4P2 390 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 UNQ5815/PRO19632Q6UWF5 114 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 Q6ZS49 121 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 SPARTQ8N0X7 666 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 CLCC1Q96S66 551 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 GINS4Q9BRT9 223 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 SLA2Q9H6Q3 261 aa12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
PTPRVP-204ENST00000639439 NOTOA8MTQ0 251 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 LINC01619G3V211 115 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 OVOL1O14753 267 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 SLC25A17O43808 307 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 DTYMKP23919 212 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 PSMB9P28065 219 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 LINC00205P59089 165 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 TPRA1Q86W33 373 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 ARPC1AQ92747 370 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 FAM103A1Q9BTL3 118 aaKnown RBP12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 ATG5Q9H1Y0 275 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 STUB1Q9UNE7 303 aa12.05□□□□□ -0.48
PTPRVP-204ENST00000639439 A0A0B4J203 849 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 SCGNO76038 276 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 RRASP10301 218 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 FXYD3Q14802 87 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 RTL8BQ17RB0 113 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 DCUN1D4Q92564 292 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 ADTRPQ96IZ2 230 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 TMEM68Q96MH6 324 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 PRR25Q96S07 402 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 TXNL4BQ9NX01 149 aaKnown RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 ZNF230Q9UIE0 474 aaPredicted RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
PTPRVP-204ENST00000639439 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 H3BUA1 57 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 CNIH1O95406 144 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 CTXN2P0C2S0 81 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 TPPP2P59282 170 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 CDNFQ49AH0 187 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 TMEM177Q53S58 311 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 C11orf87Q6NUJ2 197 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 NR2C2APQ86WQ0 139 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 GRPEL2Q8TAA5 225 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 CASTOR1Q8WTX7 329 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 RHOVQ96L33 236 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 ALX4Q9H161 411 aaPredicted RBP12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 TPSG1Q9NRR2 321 aa12.03□□□□□ -0.48
PTPRVP-204ENST00000639439 SORL1Q92673 2214 aa12.02□□□□□ -0.48
PTPRVP-204ENST00000639439 SHOXO15266 292 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 IGLV2-23P01705 113 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 PITPNAQ00169 270 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 HACD4Q5VWC8 232 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 POC5Q8NA72 575 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 MS4A10Q96PG2 267 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 DCSTAMPQ9H295 470 aa12.02□□□□□ -0.49
PTPRVP-204ENST00000639439 IGHV4OR15-8A0A075B7B6 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms