RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CLDN19Q8N6F1 224 aa3.7□□□□□ -1.82
SCN3A-209ENST00000639244 NEUROG1Q92886 237 aa3.7□□□□□ -1.82
SCN3A-209ENST00000639244 NEIL2Q969S2 332 aa3.7□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF703Q9H7S9 590 aaPredicted RBP3.7□□□□□ -1.82
SCN3A-209ENST00000639244 CDH20Q9HBT6 801 aa3.7□□□□□ -1.82
SCN3A-209ENST00000639244 DCAF13Q9NV06 445 aaKnown RBP3.7□□□□□ -1.82
SCN3A-209ENST00000639244 R4GN57 208 aa3.7□□□□□ -1.82
SCN3A-209ENST00000639244 TRAV5A0A0B4J249 113 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 DPRXA6NFQ7 191 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ADM5C9JUS6 153 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 STATHP02808 62 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 LPAR6P43657 344 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ALKAL1Q6UXT8 129 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 OR51G1Q8NGK1 321 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 C19orf24Q9BVV8 132 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 GATA5Q9BWX5 397 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 GOLGA2P5Q9HBQ8 144 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 LRP4O75096 1905 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TRBV9A0A0B4J1U6 114 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MUC21A0A0G2JKD1 596 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TCRBV5S4A2TA0A5A2 114 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MEGF11A6BM72 1044 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 NPFFO15130 113 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 KLF7O75840 302 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TBX6O95947 436 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ATP1B1P05026 303 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 BTCP35070 178 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 HLA-DRB3P79483 266 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MUC21Q5SSG8 566 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 VN1R2Q8NFZ6 395 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 IRF7Q92985 503 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SLC52A3Q9NQ40 469 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PTPRSQ13332 1948 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TRAV24A0A0B4J272 114 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 OR51F1A6NGY5 319 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TNFSF12O43508 249 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 LDB3O75112 727 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ACRV1P26436 265 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 KIR2DS2P43631 304 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 COL10A1Q03692 680 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CD69Q07108 199 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SLC25A35Q3KQZ1 300 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 NRN1LQ496H8 165 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MPV17L2Q567V2 206 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 UFSP1Q6NVU6 142 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 RNF144BQ7Z419 303 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PGBD5Q8N414 524 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SYT8Q8NBV8 401 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ATP6V0E2Q8NHE4 81 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 C2orf15Q8WU43 125 aaKnown RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SPIN2AQ99865 258 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SPIN2BQ9BPZ2 258 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 DEPDC5O75140 1603 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ERCC6L2Q5T890 1561 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 C5P01031 1676 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 IGHG3P01860 377 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CELA2AP08217 269 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CXCL1P09341 107 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 EFNB2P52799 333 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PPP1R32Q7Z5V6 425 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF433Q8N7K0 673 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 RLIMQ9NVW2 624 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 NSG2Q9Y328 171 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 AHDC1Q5TGY3 1603 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 F8VVB4 439 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 F8VWA3 439 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CHEK1O14757 476 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 RND2P52198 227 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 C9orf153Q5TBE3 101 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF740Q8NDX6 193 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 COPS9Q8WXC6 57 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 NCOR1O75376 2440 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TECPR2O15040 1411 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MSCO60682 206 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CD3EP07766 207 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SCTP09683 121 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 OPRM1P35372 400 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 EIF3IQ13347 325 aaKnown RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PLA2G12BQ9BX93 195 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TVP23BQ9NYZ1 205 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TRAPPC1Q9Y5R8 145 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 TRBV20-1A0A075B6N2 111 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 MSTNO14793 375 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 CRYGDP07320 174 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 KLK2P20151 261 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PPP1CAP62136 330 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 PEAR1Q5VY43 1037 aaPredicted RBP3.69□□□□□ -1.82
SCN3A-209ENST00000639244 Q6ZSR6 202 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 OR13H1Q8NG92 308 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 RHOJQ9H4E5 214 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 KIDINS220Q9ULH0 1771 aa3.69□□□□□ -1.82
SCN3A-209ENST00000639244 SMIM35A0A1B0GVV1 85 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 TCRBV5S2A0A599 114 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 IGLC7A0M8Q6 106 aa3.68□□□□□ -1.82
SCN3A-209ENST00000639244 GCM2O75603 506 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms