RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CKS2P33552 79 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 RPL27AP46776 148 aaKnown RBP15.9■□□□□ 0.14
SCARB2-213ENST00000638680 NUBP1P53384 320 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 TMEM265A0A087WTH1 108 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 PQLC2LA1A4F0 135 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 EAF1Q96JC9 268 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-213ENST00000638680 F5P12259 2224 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 IGHV3-72A0A0B4J1Y9 119 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 NPIPB9F8W1W9 429 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 LAMTOR1Q6IAA8 161 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 SCNM1Q9BWG6 230 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 MS4A5Q9H3V2 200 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 ZNF831Q5JPB2 1677 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 PATE3B3GLJ2 98 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 CCL8P80075 99 aa15.9■□□□□ 0.14
SCARB2-213ENST00000638680 LOC101059948A0A1B0GTJ6 334 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 TMEM14DPA8MWL7 114 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 FAM90A26D6RGX4 464 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 MPV17P39210 176 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 ATOH7Q8N100 152 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 SLC25A34Q6PIV7 304 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 GCSAMQ8N6F7 178 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 GREM1O60565 184 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 CRYBB3P26998 211 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 CD82P27701 267 aa15.89■□□□□ 0.13
SCARB2-213ENST00000638680 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
SCARB2-213ENST00000638680 ZNFX1Q9P2E3 1918 aaKnown RBP15.88■□□□□ 0.13
SCARB2-213ENST00000638680 LOC105371267A0A1B0GV96 52 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 H7C2G1 150 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 REC114Q7Z4M0 266 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 MAS1LP35410 378 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 TMEM177Q53S58 311 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 LOC107984156A0A0G2JMH3 177 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 S1PR2O95136 353 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 FOLR2P14207 255 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 ARL17AQ8IVW1 177 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 SFRP2Q96HF1 295 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 CTSBP07858 339 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 EFNB1P98172 346 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 UBTD1Q9HAC8 227 aa15.88■□□□□ 0.13
SCARB2-213ENST00000638680 RPL8P62917 257 aaKnown RBP15.88■□□□□ 0.13
SCARB2-213ENST00000638680 SELENOTP62341 195 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 OPN3Q9H1Y3 402 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-213ENST00000638680 ZNF430Q9H8G1 570 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-213ENST00000638680 LNP1A1A4G5 178 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 C16orf97H3BN30 126 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 SMIM8Q96KF7 97 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 ZIC3O60481 467 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 SPSB4Q96A44 273 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 NEU1Q99519 415 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 TMEM238LA0A1B0GVL6 79 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 A6NJY4 79 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 MARCH11A6NNE9 402 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 TMEM183AQ8IXX5 376 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 ARL6IP6Q8N6S5 226 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 CDX2Q99626 313 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-213ENST00000638680 BRWD1Q9NSI6 2320 aa15.87■□□□□ 0.13
SCARB2-213ENST00000638680 THY1P04216 161 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 NPBWR2P48146 333 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 KCNMB1Q16558 191 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 C2orf68Q2NKX9 166 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 OR8G5Q8NG78 346 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 CRISPLD2Q9H0B8 497 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 CARHSP1Q9Y2V2 147 aaKnown RBP15.86■□□□□ 0.13
SCARB2-213ENST00000638680 SMIM10L1P0DMW3 83 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 SPRED2Q7Z698 418 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 SMIM10Q96HG1 83 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 RND2P52198 227 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 MMD2Q8IY49 270 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 MSGN1A6NI15 193 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 IGHMP01871 453 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 PKIBQ9C010 78 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 ZNF506Q5JVG8 444 aa15.86■□□□□ 0.13
SCARB2-213ENST00000638680 TMEM78Q5T7P6 136 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 OR4A5Q8NH83 315 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 HILPDAQ9Y5L2 63 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 SPAG17Q6Q759 2223 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 A8MXK9 166 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 ID1P41134 155 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 ASPHD2Q6ICH7 369 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 APOBEC4Q8WW27 367 aaKnown RBP15.85■□□□□ 0.13
SCARB2-213ENST00000638680 CTHRC1Q96CG8 243 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 DNAJC4Q9NNZ3 241 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 IFI6P09912 130 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 EGR4Q05215 589 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 ITLN1Q8WWA0 313 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 ZNF324O75467 553 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-213ENST00000638680 C8orf88P0DMB2 117 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 UCP3P55916 312 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 LEMD1Q68G75 181 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 ZNF256Q9Y2P7 627 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-213ENST00000638680 F11RQ9Y624 299 aaKnown RBP15.85■□□□□ 0.13
SCARB2-213ENST00000638680 KCNMB2Q9Y691 235 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 A0A0G2JK05 382 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 CGB1A6NKQ9 187 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 EGR1P18146 543 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 GUCD1Q96NT3 240 aa15.85■□□□□ 0.13
SCARB2-213ENST00000638680 MYO16Q9Y6X6 1858 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms