RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 LSM10Q969L4 123 aaKnown RBP14.22□□□□□ -0.13
SCARB2-210ENST00000638567 GGACTQ9BVM4 153 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 ACACAQ13085 2346 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 FA2HQ7L5A8 372 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 RNF144BQ7Z419 303 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 OR2T6Q8NHC8 308 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 VN1R17PQ8TDU5 208 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 VOPP1Q96AW1 172 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 TBX15Q96SF7 602 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 PARLQ9H300 379 aa14.22□□□□□ -0.13
SCARB2-210ENST00000638567 PROB1E7EW31 1015 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 EGR1P18146 543 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 CCL1P22362 96 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 PDPNQ86YL7 162 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 OR1P1Q8NH06 330 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 IMMP1LQ96LU5 166 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 SRP19P09132 144 aaKnown RBP14.21□□□□□ -0.13
SCARB2-210ENST00000638567 MPV17P39210 176 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 SPCS3P61009 180 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 SUPT4H1P63272 117 aaKnown RBP14.21□□□□□ -0.13
SCARB2-210ENST00000638567 RTN4RL2Q86UN3 420 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 GDF15Q99988 308 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 NDFIP1Q9BT67 221 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 SPTAN1Q13813 2472 aaKnown RBP14.21□□□□□ -0.13
SCARB2-210ENST00000638567 MARCH11A6NNE9 402 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 RHBDL1O75783 438 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 OR10J1P30954 320 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 REG1BP48304 166 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 TNXAQ16473 311 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 Q6ZN92 141 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 FAM216AQ8WUB2 273 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 IL17BQ9UHF5 180 aa14.21□□□□□ -0.13
SCARB2-210ENST00000638567 MRPL14Q6P1L8 145 aaKnown RBP14.21□□□□□ -0.14
SCARB2-210ENST00000638567 OR5P3Q8WZ94 311 aa14.21□□□□□ -0.14
SCARB2-210ENST00000638567 DOCK8Q8NF50 2099 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 OR4X1Q8NH49 305 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 WDR61Q9GZS3 305 aaKnown RBP14.2□□□□□ -0.14
SCARB2-210ENST00000638567 LRRC3CA6NJW4 275 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 LYZP61626 148 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 GAMTQ14353 236 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 FNDC1Q4ZHG4 1894 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-210ENST00000638567 DOCK7Q96N67 2140 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 CLPSP04118 112 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 HTR1DP28221 377 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 KLF14Q8TD94 323 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-210ENST00000638567 VPS25Q9BRG1 176 aa14.2□□□□□ -0.14
SCARB2-210ENST00000638567 SEBOXQ9HB31 216 aaPredicted RBP14.2□□□□□ -0.14
SCARB2-210ENST00000638567 MPDU1O75352 247 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 CSN3P07498 182 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 APELAP0DMC3 54 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 FCER1GP30273 86 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 WNT5AP41221 380 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 HIST3H3Q16695 136 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 COX19Q49B96 90 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 OR4F17Q8NGA8 305 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 CA5BP1Q8WTZ4 195 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 STARD4Q96DR4 205 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 ARL16Q0P5N6 197 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 TGIF2LXQ8IUE1 241 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 FLYWCH2Q96CP2 140 aaKnown RBP14.19□□□□□ -0.14
SCARB2-210ENST00000638567 PLSCR2Q9NRY7 297 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 IL19Q9UHD0 177 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 OR51B2Q9Y5P1 312 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 ODAMA1E959 279 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 RAB29O14966 203 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 LHFPL1Q86WI0 220 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 WFIKKN1Q96NZ8 548 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 RNF2Q99496 336 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 PSMG3Q9BT73 122 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-210ENST00000638567 AAMDCQ9H7C9 122 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 SAP30LQ9HAJ7 183 aa14.19□□□□□ -0.14
SCARB2-210ENST00000638567 IGKV1D-13A0A0B4J2D9 117 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 SPAARA0A1B0GVQ0 90 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 M0R2Z0 102 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 KBTBD11O94819 623 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 DDTP30046 118 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 TGIF2LYQ8IUE0 185 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 OR8G5Q8NG78 346 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 OR2V2Q96R30 315 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 REPIN1Q9BWE0 567 aaKnown RBP14.18□□□□□ -0.14
SCARB2-210ENST00000638567 FAM117AQ9C073 453 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 SCN8AQ9UQD0 1980 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 NCBP2LA6PVI3 153 aaKnown RBP14.18□□□□□ -0.14
SCARB2-210ENST00000638567 SSTR5P35346 364 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 CCL8P80075 99 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 SIGLEC12Q96PQ1 595 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 CYTL1Q9NRR1 136 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 ONECUT1Q9UBC0 465 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 KIAA2026Q5HYC2 2103 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 THSD7BQ9C0I4 1608 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 CTSSP25774 331 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 OR1L8Q8NGR8 309 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 UMODP07911 640 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-210ENST00000638567 AGAP20933 346 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 SRP14P37108 136 aaKnown RBP14.18□□□□□ -0.14
SCARB2-210ENST00000638567 RPL31P62899 125 aaKnown RBP14.18□□□□□ -0.14
SCARB2-210ENST00000638567 CCL13Q99616 98 aa14.18□□□□□ -0.14
SCARB2-210ENST00000638567 DMRT1Q9Y5R6 373 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms