RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR10J5Q8NHC4 309 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 ABHD5Q8WTS1 349 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 NUDCD2Q8WVJ2 157 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 TOLLIPQ9H0E2 274 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 SSR3Q9UNL2 185 aa13.78□□□□□ -0.2
PNKP-230ENST00000638016 LOC100506127A0A0U1RQW1 187 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 METTL21EPA6NDL7 271 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 TMEM235A6NFC5 223 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 SLC25A17O43808 307 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 TGFBR1P36897 503 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
PNKP-230ENST00000638016 SSBP2P81877 361 aaPredicted RBP13.77□□□□□ -0.21
PNKP-230ENST00000638016 FHL3Q13643 280 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 CDNFQ49AH0 187 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 OR5H6Q8NGV6 325 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 CENPOQ9BU64 300 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 GHITMQ9H3K2 345 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
PNKP-230ENST00000638016 I3L521 148 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 ARPC1BO15143 372 aaKnown RBP13.76□□□□□ -0.21
PNKP-230ENST00000638016 RBBP9O75884 186 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 IGLV2-23P01705 113 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 TALDO1P37837 337 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 RANBP1P43487 201 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 SERPINB10P48595 397 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 RAB9AP51151 201 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
PNKP-230ENST00000638016 PJVKQ0ZLH3 352 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 ZNF660Q6AZW8 331 aaPredicted RBP13.76□□□□□ -0.21
PNKP-230ENST00000638016 TMEM65Q6PI78 240 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 PDPNQ86YL7 162 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 ST6GALNAC5Q9BVH7 336 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 NUBP2Q9Y5Y2 271 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 TNCP24821 2201 aa13.76□□□□□ -0.21
PNKP-230ENST00000638016 SSX5O60225 188 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 APOA2P02652 100 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 DEFB121Q5J5C9 76 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 PPP1R27Q86WC6 154 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 H1FOOQ8IZA3 346 aaPredicted RBP13.75□□□□□ -0.21
PNKP-230ENST00000638016 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
PNKP-230ENST00000638016 BVESQ8NE79 360 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 LFNGQ8NES3 379 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 OR5M8Q8NGP6 311 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 DPF1Q92782 380 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 SLC25A38Q96DW6 304 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 GINS4Q9BRT9 223 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
PNKP-230ENST00000638016 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.75□□□□□ -0.21
PNKP-230ENST00000638016 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
PNKP-230ENST00000638016 VSIG4Q9Y279 399 aa13.75□□□□□ -0.21
PNKP-230ENST00000638016 CD36P16671 472 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 ZNF260Q3ZCT1 412 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 HACD4Q5VWC8 232 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 TPRA1Q86W33 373 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 OR1N2Q8NGR9 330 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
PNKP-230ENST00000638016 MS4A10Q96PG2 267 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 TSNAXQ99598 290 aaKnown RBP13.74□□□□□ -0.21
PNKP-230ENST00000638016 RNF5Q99942 180 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 RHBDL2Q9NX52 303 aa13.74□□□□□ -0.21
PNKP-230ENST00000638016 RBM7Q9Y580 266 aaKnown RBP13.74□□□□□ -0.21
PNKP-230ENST00000638016 SRRM4A7MD48 611 aaKnown RBP13.73□□□□□ -0.21
PNKP-230ENST00000638016 LINC00473A8K010 186 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 SEC14L6B5MCN3 397 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 IGHV3-11P01762 117 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 NFYAP23511 347 aaPredicted RBP13.73□□□□□ -0.21
PNKP-230ENST00000638016 DTYMKP23919 212 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 DEFA5Q01523 94 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 KCTD21Q4G0X4 260 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 IDNKQ5T6J7 187 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 Q6ZS49 121 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 HARBI1Q96MB7 349 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 GPR61Q9BZJ8 451 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 SCOCQ9UIL1 159 aa13.73□□□□□ -0.21
PNKP-230ENST00000638016 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 SPDEFO95238 335 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 FCER2P06734 321 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 CRYGBP07316 175 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 PTHLHP12272 177 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 SLURP1P55000 103 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 FXYD3Q14802 87 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 MRGPRG-AS1Q2M3A8 158 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 ACTBL2Q562R1 376 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 C11orf87Q6NUJ2 197 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 ZNF562Q6V9R5 426 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 DDB2Q92466 427 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 PRR25Q96S07 402 aa13.72□□□□□ -0.21
PNKP-230ENST00000638016 IGHV4OR15-8A0A075B7B6 117 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 A0A087WW49 117 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 DIRAS3O95661 229 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.21
PNKP-230ENST00000638016 GNG2P59768 71 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 RUNX1Q01196 453 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 ZNF616Q08AN1 781 aa13.71□□□□□ -0.21
PNKP-230ENST00000638016 SRSF7Q16629 238 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms