RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 FRRS1LQ9P0K9 344 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 PGPEP1LA6NFU8 196 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
UBE3A-227ENST00000638011 CDAP32320 146 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TNFAIP6P98066 277 aaPredicted RBP13.2□□□□□ -0.3
UBE3A-227ENST00000638011 TNFRSF9Q07011 255 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
UBE3A-227ENST00000638011 IRF3Q14653 427 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 ABHD14AQ9BUJ0 271 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 HOXC4P09017 264 aaPredicted RBP13.19□□□□□ -0.3
UBE3A-227ENST00000638011 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 TAF15Q92804 592 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBE3A-227ENST00000638011 MRPS18AQ9NVS2 196 aaKnown RBP13.19□□□□□ -0.3
UBE3A-227ENST00000638011 OBSL1O75147 1896 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 TMEM202A6NGA9 273 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 NOVP48745 357 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 CHODLQ9H9P2 273 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 DNAJC25-GNG10A0A024R161 153 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 TSPAN2O60636 221 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 ZNF79Q15937 498 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 MRGPRDQ8TDS7 321 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 A8MXK9 166 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 F2RL2O00254 374 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 MMD2Q8IY49 270 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 RABAC1Q9UI14 185 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 MRM2Q9UI43 246 aaKnown RBP13.19□□□□□ -0.3
UBE3A-227ENST00000638011 A8MWV9 139 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 CNRIP1Q96F85 164 aaPredicted RBP13.19□□□□□ -0.3
UBE3A-227ENST00000638011 TRAV8-4A0A0B4J246 113 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 OR8B2Q96RD0 313 aa13.19□□□□□ -0.3
UBE3A-227ENST00000638011 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
UBE3A-227ENST00000638011 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 CCL11P51671 97 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 TMEM95Q3KNT9 176 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 GAGE13Q4V321 117 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 ZNF645Q8N7E2 425 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 PHLDA1Q8WV24 401 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-227ENST00000638011 UBE2CO00762 179 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 CCSMST1Q4G0I0 132 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 LPAR2Q9HBW0 351 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 SPATA46Q5T0L3 261 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 SLC23A3Q6PIS1 610 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 ANKRD10Q9NXR5 420 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 MEGF9Q9H1U4 602 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 PPP1R3EQ9H7J1 279 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-227ENST00000638011 KCNMB2Q9Y691 235 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 F12P00748 615 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-227ENST00000638011 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
UBE3A-227ENST00000638011 HOXA5P20719 270 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
UBE3A-227ENST00000638011 PNLIPP16233 465 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 CACNG7P62955 275 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 FOXF1Q12946 379 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 PMVKQ15126 192 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 GPR183P32249 361 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ORAOV1Q8WV07 137 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 DEFB108AA8MXU0 73 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 SPRY3O43610 288 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ETHE1O95571 254 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 TMPRSS2O15393 492 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ASAH2BP0C7U1 165 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 SUMO2P61956 95 aaKnown RBP13.17□□□□□ -0.3
UBE3A-227ENST00000638011 OR9G4Q8NGQ1 327 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 RGP1Q92546 391 aaPredicted RBP13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ANOS1P23352 680 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 PAQR9Q6ZVX9 377 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 CXCL13O43927 109 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 SBK3P0C264 359 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 CTLA4P16410 223 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 ZNF32P17041 273 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 GALNSP34059 522 aa13.17□□□□□ -0.3
UBE3A-227ENST00000638011 RPS27P42677 84 aaKnown RBP13.17□□□□□ -0.3
UBE3A-227ENST00000638011 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 NUBP1P53384 320 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 KIR3DL3Q8N743 410 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 GPR82Q96P67 336 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 TMIGD3P0DMS9 266 aaPredicted RBP13.16□□□□□ -0.3
UBE3A-227ENST00000638011 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 PLXNB3Q9ULL4 1909 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 IGLV3-27P01718 113 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 GLULP15104 373 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 MDP1Q86V88 176 aa13.16□□□□□ -0.3
UBE3A-227ENST00000638011 DNASE2BQ8WZ79 361 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms