RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 PSMB3P49720 205 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 COL10A1Q03692 680 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 MZT1Q08AG7 82 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 PRAMEF6Q5VXH4 476 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 MBNL2Q5VZF2 373 aaKnown RBP13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 IGFL2Q6UWQ7 119 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 BEND4Q6ZU67 534 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 GAR1Q9NY12 217 aaKnown RBP13.42□□□□□ -0.26
CHRNA7-221ENST00000636898 ELOA3CA0A087WX78 387 aaPredicted RBP13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 SPINT2O43291 252 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 ZG16O60844 167 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 KBTBD11O94819 623 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 MDKP21741 143 aaPredicted RBP13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 FGF7P21781 194 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 S100A2P29034 98 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 SSTR5P35346 364 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 GNB2P62879 340 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 BTNL3Q6UXE8 466 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 OR13A1Q8NGR1 328 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 SMIM7Q9BQ49 75 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 WASF3Q9UPY6 502 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 PCNX2A6NKB5 2137 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 OR5H1A6NKK0 313 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 PRR33A8MZF0 331 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 C15orf65H3BRN8 121 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 GCH1P30793 250 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 NKX6-1P78426 367 aaPredicted RBP13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 VWA1Q6PCB0 445 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 FAM180AQ6UWF9 173 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 C9orf106Q8NAJ2 232 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 OR10G9Q8NGN4 311 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 OR10G7Q8NGN6 311 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 SARAFQ96BY9 339 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 NPCDR1Q9BY65 106 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 ACTR3CQ9C0K3 210 aaPredicted RBP13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 PLSCR4Q9NRQ2 329 aa13.41□□□□□ -0.26
CHRNA7-221ENST00000636898 DIDO1Q9BTC0 2240 aaKnown RBP13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 FAM90A9PA6NNJ1 464 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 LINC00473A8K010 186 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 WISP2O76076 250 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 IGHV2-70P01814 119 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 NCR3LG1Q68D85 454 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 ZNF709Q8N972 641 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 UFSP2Q9NUQ7 469 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 METRNQ9UJH8 293 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 CACNA1DQ01668 2161 aa13.4□□□□□ -0.26
CHRNA7-221ENST00000636898 PPP1R2P9O14990 202 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 FABP6P51161 128 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 SLC25A22Q9H936 323 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 MSL2Q9HCI7 577 aa13.4□□□□□ -0.27
CHRNA7-221ENST00000636898 PTPRBP23467 1997 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 TRAV17A0A0B4J275 112 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 IGHV2OR16-5A0A0B4J2B6 119 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 SOX15O60248 233 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 CCL11P51671 97 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 HOXA4Q00056 320 aaPredicted RBP13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 Q3ZCU0 254 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 SPNS3Q6ZMD2 512 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 DIRC2Q96SL1 478 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 PSG11Q9UQ72 335 aa13.39□□□□□ -0.27
CHRNA7-221ENST00000636898 PHOX2AO14813 284 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 NKX2-8O15522 239 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 RBMXL2O75526 392 aaKnown RBP13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 GZMHP20718 246 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 FOXF2Q12947 444 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 CD177Q8N6Q3 437 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 ABHD5Q8WTS1 349 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 TRGC1P0CF51 173 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 PRDX2P32119 198 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 TFF3Q07654 80 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 P2RY6Q15077 328 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 ADIRFQ15847 76 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 CR1LQ2VPA4 569 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 TPRX1Q8N7U7 411 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 LRRC29Q8WV35 223 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 FRZBQ92765 325 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 RAB24Q969Q5 203 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 R3HDM4Q96D70 268 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 PYGO2Q9BRQ0 406 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 DMRT1Q9Y5R6 373 aa13.38□□□□□ -0.27
CHRNA7-221ENST00000636898 IGHV3-43A0A0B4J1X8 118 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms